Detailed information NTG0634823

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: N7E62_RS13675
• Genome accession: NZ_CP104907
• Coordinates: 2819225..2820343 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Ab-3557
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2814225..2825343

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7E62_RS13665 (N7E62_13670)	-	2817341..2818033 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
N7E62_RS13670 (N7E62_13675)	pilT	2818160..2819197 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
N7E62_RS13675 (N7E62_13680)	pilU	2819225..2820343 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
N7E62_RS13680 (N7E62_13685)	fur	2820413..2820850 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
N7E62_RS13685 (N7E62_13690)	-	2820962..2821360 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
N7E62_RS13690 (N7E62_13695)	-	2821415..2821738 (-)	324	WP_000442587.1	RnfH family protein	-
N7E62_RS13695 (N7E62_13700)	-	2821738..2822805 (-)	1068	WP_002019572.1	hypothetical protein	-
N7E62_RS13700 (N7E62_13705)	-	2822958..2823413 (-)	456	WP_000782976.1	bacteriohemerythrin	-
N7E62_RS13705 (N7E62_13710)	-	2823666..2824514 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=634823 N7E62_RS13675 WP_000347039.1 2819225..2820343(+) (pilU) [Acinetobacter baumannii strain Ab-3557]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=634823 N7E62_RS13675 WP_000347039.1 2819225..2820343(+) (pilU) [Acinetobacter baumannii strain Ab-3557]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395