Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PALA8_RS02110 Genome accession   NZ_CP104869
Coordinates   454825..455232 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain PALA8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 449825..460232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PALA8_RS02080 (PALA8_00413) - 449872..450876 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  PALA8_RS02085 (PALA8_00414) pyrR 450900..451412 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PALA8_RS02090 (PALA8_00415) ruvX 451524..451958 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  PALA8_RS02095 (PALA8_00416) - 451958..452527 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  PALA8_RS02100 (PALA8_00417) - 452576..453469 (-) 894 WP_003084580.1 TonB family protein -
  PALA8_RS02105 (PALA8_00418) gshB 453616..454569 (-) 954 WP_269973526.1 glutathione synthase -
  PALA8_RS02110 (PALA8_00419) pilG 454825..455232 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  PALA8_RS02115 (PALA8_00420) pilH 455279..455644 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  PALA8_RS02120 (PALA8_00421) - 455695..456231 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  PALA8_RS02125 (PALA8_00422) pilJ 456316..458364 (+) 2049 WP_269973527.1 chemotaxis chemoreceptor PilJ -
  PALA8_RS02130 (PALA8_00423) pilK 458425..459300 (+) 876 WP_003128960.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=634259 PALA8_RS02110 WP_003084583.1 454825..455232(+) (pilG) [Pseudomonas aeruginosa strain PALA8]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=634259 PALA8_RS02110 WP_003084583.1 454825..455232(+) (pilG) [Pseudomonas aeruginosa strain PALA8]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385