Detailed information
Bioinformatically predicted
Overview
| Name | pilF | Type | Machinery gene |
| Locus tag | LSQ66_RS01755 | Genome accession | NZ_CP088952 |
| Coordinates | 355206..356930 (-) | Length | 574 a.a. |
| NCBI ID | WP_231768102.1 | Uniprot ID | - |
| Organism | Massilia endophytica strain DM-R-R2A-13 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 303383..391510 | 355206..356930 | within | 0 |
Gene organization within MGE regions
Location: 303383..391510
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSQ66_RS01490 (LSQ66_01490) | - | 303643..304086 (-) | 444 | WP_231768054.1 | hypothetical protein | - |
| LSQ66_RS01495 (LSQ66_01495) | rpoH | 304211..305104 (-) | 894 | WP_407659618.1 | RNA polymerase sigma factor RpoH | - |
| LSQ66_RS01500 (LSQ66_01500) | ftsX | 305405..306319 (-) | 915 | WP_231768056.1 | permease-like cell division protein FtsX | - |
| LSQ66_RS01505 (LSQ66_01505) | - | 306316..306981 (-) | 666 | WP_231768057.1 | cell division ATP-binding protein FtsE | - |
| LSQ66_RS01510 (LSQ66_01510) | pilA | 306987..308021 (-) | 1035 | WP_231768058.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| LSQ66_RS01515 (LSQ66_01515) | - | 308125..309099 (-) | 975 | WP_231768059.1 | MerR family transcriptional regulator | - |
| LSQ66_RS01520 (LSQ66_01520) | - | 309722..310801 (+) | 1080 | WP_231768060.1 | porin | - |
| LSQ66_RS01525 (LSQ66_01525) | - | 310875..311456 (+) | 582 | WP_231768061.1 | hypothetical protein | - |
| LSQ66_RS01530 (LSQ66_01530) | - | 311453..313150 (-) | 1698 | WP_231768062.1 | thiamine pyrophosphate-binding protein | - |
| LSQ66_RS01540 (LSQ66_01540) | glpK | 313644..315137 (+) | 1494 | WP_231768063.1 | glycerol kinase GlpK | - |
| LSQ66_RS01545 (LSQ66_01545) | mraZ | 315678..316106 (+) | 429 | WP_231768064.1 | division/cell wall cluster transcriptional repressor MraZ | - |
| LSQ66_RS01550 (LSQ66_01550) | rsmH | 316116..317081 (+) | 966 | WP_231768065.1 | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | - |
| LSQ66_RS01555 (LSQ66_01555) | ftsL | 317078..317350 (+) | 273 | WP_231768066.1 | cell division protein FtsL | - |
| LSQ66_RS01560 (LSQ66_01560) | - | 317350..319131 (+) | 1782 | WP_231768067.1 | penicillin-binding protein 2 | - |
| LSQ66_RS01565 (LSQ66_01565) | - | 319131..320657 (+) | 1527 | WP_231768068.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase | - |
| LSQ66_RS01570 (LSQ66_01570) | murF | 320657..322033 (+) | 1377 | WP_231768069.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| LSQ66_RS01575 (LSQ66_01575) | mraY | 322033..323202 (+) | 1170 | WP_231768070.1 | phospho-N-acetylmuramoyl-pentapeptide- transferase | - |
| LSQ66_RS01580 (LSQ66_01580) | murD | 323210..324712 (+) | 1503 | WP_231768071.1 | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase | - |
| LSQ66_RS01585 (LSQ66_01585) | ftsW | 324712..325917 (+) | 1206 | WP_231768072.1 | putative lipid II flippase FtsW | - |
| LSQ66_RS01590 (LSQ66_01590) | murG | 325914..326981 (+) | 1068 | WP_231768073.1 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | - |
| LSQ66_RS01595 (LSQ66_01595) | murC | 326978..328369 (+) | 1392 | WP_231768074.1 | UDP-N-acetylmuramate--L-alanine ligase | - |
| LSQ66_RS01600 (LSQ66_01600) | - | 328373..329332 (+) | 960 | WP_231768075.1 | D-alanine--D-alanine ligase | - |
| LSQ66_RS01605 (LSQ66_01605) | - | 329342..330106 (+) | 765 | WP_231768076.1 | cell division protein FtsQ/DivIB | - |
| LSQ66_RS01610 (LSQ66_01610) | ftsA | 330121..331353 (+) | 1233 | WP_231768077.1 | cell division protein FtsA | - |
| LSQ66_RS01615 (LSQ66_01615) | ftsZ | 331480..332685 (+) | 1206 | WP_231768078.1 | cell division protein FtsZ | - |
| LSQ66_RS01620 (LSQ66_01620) | - | 332810..333313 (+) | 504 | WP_231768079.1 | peroxiredoxin | - |
| LSQ66_RS01630 (LSQ66_01630) | - | 335060..335668 (+) | 609 | WP_231768080.1 | DUF2971 domain-containing protein | - |
| LSQ66_RS01635 (LSQ66_01635) | - | 335950..336441 (+) | 492 | WP_231768081.1 | type VI secretion system tube protein Hcp | - |
| LSQ66_RS01640 (LSQ66_01640) | - | 336451..336939 (+) | 489 | WP_231768082.1 | penicillin-insensitive murein endopeptidase | - |
| LSQ66_RS01645 (LSQ66_01645) | - | 337368..337778 (+) | 411 | WP_231768083.1 | STY0301 family protein | - |
| LSQ66_RS01650 (LSQ66_01650) | - | 337796..338152 (-) | 357 | WP_231768084.1 | DUF3088 domain-containing protein | - |
| LSQ66_RS01655 (LSQ66_01655) | - | 338168..339862 (-) | 1695 | WP_231768085.1 | tannase/feruloyl esterase family alpha/beta hydrolase | - |
| LSQ66_RS01660 (LSQ66_01660) | - | 339995..340480 (-) | 486 | WP_231768086.1 | SET domain-containing protein | - |
| LSQ66_RS01665 (LSQ66_01665) | - | 340519..340917 (-) | 399 | WP_231768087.1 | hypothetical protein | - |
| LSQ66_RS01670 (LSQ66_01670) | - | 341059..341901 (+) | 843 | WP_231770025.1 | DMT family transporter | - |
| LSQ66_RS01675 (LSQ66_01675) | lpxC | 341944..342879 (+) | 936 | WP_231768088.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| LSQ66_RS01680 (LSQ66_01680) | - | 342883..343350 (-) | 468 | WP_231768089.1 | DciA family protein | - |
| LSQ66_RS01685 (LSQ66_01685) | secA | 343578..346340 (+) | 2763 | WP_231768090.1 | preprotein translocase subunit SecA | - |
| LSQ66_RS01690 (LSQ66_01690) | - | 346476..346775 (-) | 300 | WP_231768091.1 | helix-turn-helix domain containing protein | - |
| LSQ66_RS01695 (LSQ66_01695) | - | 346958..347563 (+) | 606 | WP_231768092.1 | response regulator | - |
| LSQ66_RS01700 (LSQ66_01700) | - | 347621..347986 (+) | 366 | WP_231768093.1 | Hpt domain-containing protein | - |
| LSQ66_RS01705 (LSQ66_01705) | - | 348005..348406 (+) | 402 | WP_231768094.1 | response regulator | - |
| LSQ66_RS01710 (LSQ66_01710) | argJ | 348485..349723 (+) | 1239 | WP_231768095.1 | bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ | - |
| LSQ66_RS01715 (LSQ66_01715) | - | 349723..350586 (+) | 864 | WP_231768096.1 | ATP-binding protein | - |
| LSQ66_RS01720 (LSQ66_01720) | - | 350583..350972 (+) | 390 | WP_269449128.1 | NUDIX domain-containing protein | - |
| LSQ66_RS01725 (LSQ66_01725) | - | 351037..351453 (-) | 417 | WP_231768097.1 | nuclear transport factor 2 family protein | - |
| LSQ66_RS01730 (LSQ66_01730) | yacG | 351453..351638 (-) | 186 | WP_231768098.1 | DNA gyrase inhibitor YacG | - |
| LSQ66_RS01735 (LSQ66_01735) | zapD | 351641..352396 (-) | 756 | WP_231768099.1 | cell division protein ZapD | - |
| LSQ66_RS01740 (LSQ66_01740) | coaE | 352461..353093 (-) | 633 | WP_231768100.1 | dephospho-CoA kinase | - |
| LSQ66_RS01745 (LSQ66_01745) | pilD | 353096..353965 (-) | 870 | WP_269449129.1 | A24 family peptidase | Machinery gene |
| LSQ66_RS01750 (LSQ66_01750) | pilC | 353981..355195 (-) | 1215 | WP_231768101.1 | type II secretion system F family protein | Machinery gene |
| LSQ66_RS01755 (LSQ66_01755) | pilF | 355206..356930 (-) | 1725 | WP_231768102.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| LSQ66_RS01760 (LSQ66_01760) | - | 356990..358282 (-) | 1293 | WP_231768103.1 | HlyC/CorC family transporter | - |
| LSQ66_RS01765 (LSQ66_01765) | - | 358608..359555 (+) | 948 | WP_231768104.1 | IS110 family transposase | - |
| LSQ66_RS01770 (LSQ66_01770) | - | 359601..360449 (+) | 849 | WP_231768105.1 | AraC family transcriptional regulator | - |
| LSQ66_RS01775 (LSQ66_01775) | - | 360524..361015 (+) | 492 | WP_269449130.1 | NADH-quinone oxidoreductase subunit B family protein | - |
| LSQ66_RS01780 (LSQ66_01780) | - | 361055..362287 (+) | 1233 | WP_231768106.1 | glutamate carboxypeptidase | - |
| LSQ66_RS01785 (LSQ66_01785) | uraH | 362272..362625 (-) | 354 | WP_231768107.1 | hydroxyisourate hydrolase | - |
| LSQ66_RS01790 (LSQ66_01790) | puuE | 362720..363679 (+) | 960 | WP_231770029.1 | allantoinase PuuE | - |
| LSQ66_RS01795 (LSQ66_01795) | xdhA | 363759..365228 (+) | 1470 | WP_231768108.1 | xanthine dehydrogenase small subunit | - |
| LSQ66_RS01800 (LSQ66_01800) | xdhB | 365240..367567 (+) | 2328 | WP_231768109.1 | xanthine dehydrogenase molybdopterin binding subunit | - |
| LSQ66_RS01805 (LSQ66_01805) | xdhC | 367577..368596 (+) | 1020 | WP_231768110.1 | xanthine dehydrogenase accessory protein XdhC | - |
| LSQ66_RS01810 (LSQ66_01810) | guaD | 368616..369932 (+) | 1317 | WP_231768111.1 | guanine deaminase | - |
| LSQ66_RS01815 (LSQ66_01815) | - | 369963..371411 (+) | 1449 | WP_231768112.1 | adenosine deaminase | - |
| LSQ66_RS01820 (LSQ66_01820) | - | 371854..374244 (+) | 2391 | WP_231768113.1 | TonB-dependent receptor | - |
| LSQ66_RS01825 (LSQ66_01825) | - | 374379..376073 (+) | 1695 | WP_231768114.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| LSQ66_RS01830 (LSQ66_01830) | - | 376077..377291 (+) | 1215 | WP_231768115.1 | phospholipase D-like domain-containing protein | - |
| LSQ66_RS01835 (LSQ66_01835) | - | 377292..378350 (+) | 1059 | WP_231768116.1 | S1/P1 nuclease | - |
| LSQ66_RS01840 (LSQ66_01840) | - | 378369..379124 (-) | 756 | WP_231768117.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LSQ66_RS01845 (LSQ66_01845) | - | 379199..379780 (+) | 582 | WP_231768118.1 | NUDIX domain-containing protein | - |
| LSQ66_RS01850 (LSQ66_01850) | - | 379871..380131 (+) | 261 | WP_231770030.1 | c-type cytochrome | - |
| LSQ66_RS01855 (LSQ66_01855) | - | 380353..381300 (+) | 948 | WP_231765801.1 | IS110 family transposase | - |
| LSQ66_RS01860 (LSQ66_01860) | - | 381332..382300 (-) | 969 | WP_231768119.1 | ABC transporter permease | - |
| LSQ66_RS01865 (LSQ66_01865) | - | 382305..383387 (-) | 1083 | WP_231768120.1 | ABC transporter permease | - |
| LSQ66_RS01870 (LSQ66_01870) | - | 383384..384913 (-) | 1530 | WP_231768121.1 | ABC transporter ATP-binding protein | - |
| LSQ66_RS01875 (LSQ66_01875) | - | 384994..385989 (-) | 996 | WP_231768122.1 | BMP family protein | - |
| LSQ66_RS01880 (LSQ66_01880) | - | 386486..388738 (+) | 2253 | WP_231768123.1 | TonB-dependent receptor | - |
| LSQ66_RS01885 (LSQ66_01885) | - | 388804..389961 (-) | 1158 | WP_231768124.1 | sensor histidine kinase KdpD | - |
| LSQ66_RS01890 (LSQ66_01890) | - | 390045..390950 (-) | 906 | WP_231768125.1 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 574 a.a. Molecular weight: 62172.64 Da Isoelectric Point: 5.0270
>NTDB_id=634101 LSQ66_RS01755 WP_231768102.1 355206..356930(-) (pilF) [Massilia endophytica strain DM-R-R2A-13]
MASVQTNSSAGAPVSGLARALMQAGKLTLPQADALNRRAQAEKLPFIDVLVSSGTVNARELAVFCSETFAYPLMDLAAFS
IDALPPKIIEPKLMQSQRVVALAKRGNKMSVAISDPTNTQALDQIKFQTESSVEPVIVPHDALIRLLNELGKSADQTIAD
LAGEEGDIQFAEEEEANAAPDPSTDVEDAPVVRFLNKMLMDAVNMGASDLHFEPFEKFYRIRFRVDGVLVEHAQPPVSIK
EKLVSRIKVLARLDISEKRIPQDGRMRLIVSPTKTIDLRISTLPTLFGEKVVMRILDATQAQMGIDSLGYDPDQKELLLD
AIQRPYGMVLVTGPTGSGKTVSLYTCLNILNKPGINISTAEDPAEINLPGVNQVNVNDKAGLTFPVALKSFLRQDPDIIM
VGEIRDLETADIAIKAAQTGHMVFSTLHTNDAPSTLTRLMNMGVAPFNIASSVILITAQRLARRLCTCKQPVDISEDLLR
RAGFKDEELDGNWKPYGPVGCERCNGSGYKGRVGIYQIMPITPAIEALILASGNAMQIAAQSESEGVKSLRQSGLVKVKA
GLTSLEEVLGCTNE
MASVQTNSSAGAPVSGLARALMQAGKLTLPQADALNRRAQAEKLPFIDVLVSSGTVNARELAVFCSETFAYPLMDLAAFS
IDALPPKIIEPKLMQSQRVVALAKRGNKMSVAISDPTNTQALDQIKFQTESSVEPVIVPHDALIRLLNELGKSADQTIAD
LAGEEGDIQFAEEEEANAAPDPSTDVEDAPVVRFLNKMLMDAVNMGASDLHFEPFEKFYRIRFRVDGVLVEHAQPPVSIK
EKLVSRIKVLARLDISEKRIPQDGRMRLIVSPTKTIDLRISTLPTLFGEKVVMRILDATQAQMGIDSLGYDPDQKELLLD
AIQRPYGMVLVTGPTGSGKTVSLYTCLNILNKPGINISTAEDPAEINLPGVNQVNVNDKAGLTFPVALKSFLRQDPDIIM
VGEIRDLETADIAIKAAQTGHMVFSTLHTNDAPSTLTRLMNMGVAPFNIASSVILITAQRLARRLCTCKQPVDISEDLLR
RAGFKDEELDGNWKPYGPVGCERCNGSGYKGRVGIYQIMPITPAIEALILASGNAMQIAAQSESEGVKSLRQSGLVKVKA
GLTSLEEVLGCTNE
Nucleotide
Download Length: 1725 bp
>NTDB_id=634101 LSQ66_RS01755 WP_231768102.1 355206..356930(-) (pilF) [Massilia endophytica strain DM-R-R2A-13]
ATGGCATCAGTGCAAACCAACTCGTCGGCTGGCGCTCCCGTGTCAGGGCTGGCGCGGGCGCTGATGCAGGCCGGGAAGCT
GACCCTGCCGCAGGCGGACGCGCTCAACCGCCGGGCCCAGGCCGAAAAGCTGCCCTTCATCGACGTGCTGGTTTCCAGCG
GCACGGTGAACGCACGCGAGCTGGCCGTGTTCTGCTCCGAAACTTTCGCCTATCCCCTGATGGACCTGGCGGCCTTCAGC
ATCGACGCCCTGCCGCCCAAGATCATCGAGCCCAAGCTGATGCAGAGCCAGCGGGTGGTGGCCCTGGCCAAGCGCGGGAA
CAAGATGTCCGTTGCCATCTCGGACCCCACGAATACCCAGGCGCTGGACCAGATCAAGTTCCAGACCGAGAGCTCGGTGG
AACCCGTGATCGTGCCGCACGATGCGCTGATCCGCCTGCTGAATGAACTGGGCAAGAGCGCCGACCAGACCATCGCCGAC
CTGGCGGGCGAGGAAGGCGACATCCAGTTCGCCGAGGAAGAGGAGGCGAACGCCGCCCCCGATCCTTCCACGGACGTGGA
AGACGCGCCGGTGGTGCGCTTCCTGAACAAGATGCTGATGGACGCCGTGAACATGGGCGCGTCCGACCTGCACTTCGAAC
CTTTCGAGAAGTTCTACCGCATCCGCTTCCGCGTGGACGGGGTGCTGGTGGAGCATGCGCAGCCCCCTGTCTCCATCAAG
GAAAAGCTGGTCTCGCGCATCAAGGTGCTGGCGCGGCTGGACATCTCGGAGAAGCGCATTCCGCAGGACGGGCGCATGCG
CCTGATCGTGTCTCCTACGAAGACCATCGACCTGCGCATCTCCACCCTGCCCACCCTCTTCGGCGAGAAGGTGGTGATGC
GTATTCTGGATGCGACCCAGGCCCAGATGGGCATCGACTCCCTGGGCTATGACCCGGACCAGAAGGAGCTGCTGCTGGAC
GCCATCCAGCGCCCCTACGGCATGGTGCTGGTGACGGGGCCCACCGGCTCGGGCAAGACGGTGTCCCTGTACACCTGCCT
GAACATCCTGAACAAGCCCGGCATCAATATCTCGACGGCGGAAGACCCGGCCGAGATCAACCTGCCCGGCGTGAACCAGG
TGAACGTGAACGACAAGGCGGGGCTTACCTTCCCCGTCGCGCTGAAATCCTTCCTGCGCCAGGACCCGGACATCATCATG
GTGGGTGAGATCCGCGACCTGGAAACGGCGGACATTGCGATCAAGGCCGCACAGACCGGCCACATGGTGTTTTCCACCCT
GCACACGAACGACGCACCGTCCACACTCACACGCCTGATGAACATGGGCGTGGCTCCCTTCAATATCGCCTCCTCCGTCA
TCCTGATCACGGCGCAGCGCCTGGCGCGCCGCCTGTGCACCTGCAAGCAGCCGGTCGACATCTCGGAAGACCTGCTGCGC
CGCGCAGGCTTCAAGGACGAAGAACTGGACGGCAACTGGAAGCCATACGGCCCCGTGGGCTGCGAGCGCTGCAACGGCTC
GGGCTACAAGGGCCGCGTGGGCATCTACCAGATCATGCCGATCACGCCCGCCATCGAGGCGCTGATCCTTGCCAGCGGCA
ACGCGATGCAGATCGCCGCGCAGTCGGAGTCGGAAGGCGTGAAGTCGCTGCGGCAGTCCGGACTGGTGAAGGTCAAGGCA
GGCCTCACCAGCCTGGAAGAAGTGCTGGGCTGCACGAACGAATAG
ATGGCATCAGTGCAAACCAACTCGTCGGCTGGCGCTCCCGTGTCAGGGCTGGCGCGGGCGCTGATGCAGGCCGGGAAGCT
GACCCTGCCGCAGGCGGACGCGCTCAACCGCCGGGCCCAGGCCGAAAAGCTGCCCTTCATCGACGTGCTGGTTTCCAGCG
GCACGGTGAACGCACGCGAGCTGGCCGTGTTCTGCTCCGAAACTTTCGCCTATCCCCTGATGGACCTGGCGGCCTTCAGC
ATCGACGCCCTGCCGCCCAAGATCATCGAGCCCAAGCTGATGCAGAGCCAGCGGGTGGTGGCCCTGGCCAAGCGCGGGAA
CAAGATGTCCGTTGCCATCTCGGACCCCACGAATACCCAGGCGCTGGACCAGATCAAGTTCCAGACCGAGAGCTCGGTGG
AACCCGTGATCGTGCCGCACGATGCGCTGATCCGCCTGCTGAATGAACTGGGCAAGAGCGCCGACCAGACCATCGCCGAC
CTGGCGGGCGAGGAAGGCGACATCCAGTTCGCCGAGGAAGAGGAGGCGAACGCCGCCCCCGATCCTTCCACGGACGTGGA
AGACGCGCCGGTGGTGCGCTTCCTGAACAAGATGCTGATGGACGCCGTGAACATGGGCGCGTCCGACCTGCACTTCGAAC
CTTTCGAGAAGTTCTACCGCATCCGCTTCCGCGTGGACGGGGTGCTGGTGGAGCATGCGCAGCCCCCTGTCTCCATCAAG
GAAAAGCTGGTCTCGCGCATCAAGGTGCTGGCGCGGCTGGACATCTCGGAGAAGCGCATTCCGCAGGACGGGCGCATGCG
CCTGATCGTGTCTCCTACGAAGACCATCGACCTGCGCATCTCCACCCTGCCCACCCTCTTCGGCGAGAAGGTGGTGATGC
GTATTCTGGATGCGACCCAGGCCCAGATGGGCATCGACTCCCTGGGCTATGACCCGGACCAGAAGGAGCTGCTGCTGGAC
GCCATCCAGCGCCCCTACGGCATGGTGCTGGTGACGGGGCCCACCGGCTCGGGCAAGACGGTGTCCCTGTACACCTGCCT
GAACATCCTGAACAAGCCCGGCATCAATATCTCGACGGCGGAAGACCCGGCCGAGATCAACCTGCCCGGCGTGAACCAGG
TGAACGTGAACGACAAGGCGGGGCTTACCTTCCCCGTCGCGCTGAAATCCTTCCTGCGCCAGGACCCGGACATCATCATG
GTGGGTGAGATCCGCGACCTGGAAACGGCGGACATTGCGATCAAGGCCGCACAGACCGGCCACATGGTGTTTTCCACCCT
GCACACGAACGACGCACCGTCCACACTCACACGCCTGATGAACATGGGCGTGGCTCCCTTCAATATCGCCTCCTCCGTCA
TCCTGATCACGGCGCAGCGCCTGGCGCGCCGCCTGTGCACCTGCAAGCAGCCGGTCGACATCTCGGAAGACCTGCTGCGC
CGCGCAGGCTTCAAGGACGAAGAACTGGACGGCAACTGGAAGCCATACGGCCCCGTGGGCTGCGAGCGCTGCAACGGCTC
GGGCTACAAGGGCCGCGTGGGCATCTACCAGATCATGCCGATCACGCCCGCCATCGAGGCGCTGATCCTTGCCAGCGGCA
ACGCGATGCAGATCGCCGCGCAGTCGGAGTCGGAAGGCGTGAAGTCGCTGCGGCAGTCCGGACTGGTGAAGGTCAAGGCA
GGCCTCACCAGCCTGGAAGAAGTGCTGGGCTGCACGAACGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilF | Neisseria gonorrhoeae MS11 |
53.534 |
98.606 |
0.528 |
| pilB | Acinetobacter baylyi ADP1 |
52.364 |
99.477 |
0.521 |
| pilB | Acinetobacter baumannii D1279779 |
52.364 |
99.477 |
0.521 |
| pilB | Legionella pneumophila strain ERS1305867 |
48.485 |
97.735 |
0.474 |
| pilB | Vibrio cholerae strain A1552 |
46.346 |
97.735 |
0.453 |
| pilB | Vibrio parahaemolyticus RIMD 2210633 |
45.31 |
98.432 |
0.446 |
| pilB | Vibrio campbellii strain DS40M4 |
45.018 |
97.909 |
0.441 |
| pilB | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.509 |
92.16 |
0.364 |
| pilF | Thermus thermophilus HB27 |
39.024 |
92.857 |
0.362 |