Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   STP1_RS05915 Genome accession   NC_022737
Coordinates   1207941..1208621 (-) Length   226 a.a.
NCBI ID   WP_023374226.1    Uniprot ID   -
Organism   Staphylococcus pasteuri SP1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1202941..1213621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STP1_RS05895 (STP1_1142) - 1203227..1204069 (-) 843 WP_023374222.1 DUF4064 domain-containing protein -
  STP1_RS05900 (STP1_1143) - 1204192..1206186 (-) 1995 WP_023374223.1 ABC transporter permease -
  STP1_RS05905 (STP1_1144) - 1206204..1206950 (-) 747 WP_023374224.1 ABC transporter ATP-binding protein -
  STP1_RS05910 (STP1_1145) braS 1207054..1207950 (-) 897 WP_023374225.1 sensor histidine kinase Regulator
  STP1_RS05915 (STP1_1146) braR 1207941..1208621 (-) 681 WP_023374226.1 response regulator transcription factor Regulator
  STP1_RS12805 (STP1_1147) - 1208643..1208810 (-) 168 WP_155979575.1 hypothetical protein -
  STP1_RS05920 (STP1_1148) - 1209057..1210511 (+) 1455 WP_023374228.1 alkaline phosphatase -
  STP1_RS12560 - 1210594..1210695 (-) 102 WP_015364644.1 SE2200 family small protein -
  STP1_RS05925 (STP1_1149) - 1210875..1212347 (-) 1473 WP_023374229.1 poly-gamma-glutamate hydrolase family protein -
  STP1_RS05930 (STP1_1150) - 1212603..1213052 (-) 450 WP_023374230.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26116.29 Da        Isoelectric Point: 5.4099

>NTDB_id=63348 STP1_RS05915 WP_023374226.1 1207941..1208621(-) (braR) [Staphylococcus pasteuri SP1]
MKIYIVEDDLVIAESLASELKKWNYDVKMAKQFSHVLDDFKGYLPDLVLLDINLPTLNGFHWCQEMRKISNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKVQALLRRTYDLAVSNNELNVKGCKLIVDEAKLIFQDDATQLSLTELQIAK
LLFQNEGKFVNRTALIEKCWESENYIDDNTLAVNMTRLRKKLSQIGLTDFIETKKNVGYRVYIRCY

Nucleotide


Download         Length: 681 bp        

>NTDB_id=63348 STP1_RS05915 WP_023374226.1 1207941..1208621(-) (braR) [Staphylococcus pasteuri SP1]
ATGAAGATTTATATAGTAGAAGATGACTTAGTCATTGCAGAAAGTTTAGCAAGTGAACTTAAGAAATGGAACTATGACGT
TAAGATGGCAAAACAATTTTCGCATGTTTTAGATGATTTCAAAGGCTATCTACCTGACTTAGTACTACTAGATATTAATT
TACCTACTTTAAATGGATTCCATTGGTGCCAAGAAATGAGAAAAATCTCGAACGTACCTATTATATTTATTAGTTCAAGG
ACAGATAATATGGACCAAATTATGGCGATTCAAATGGGTGGCGATGATTTTATTGAGAAACCATTCAATTTATCATTAAC
AGTTGCTAAAGTACAAGCTTTATTACGACGAACTTATGATTTAGCTGTATCTAACAACGAATTAAATGTTAAAGGATGTA
AACTTATCGTTGATGAGGCTAAATTAATATTTCAAGATGATGCGACACAACTATCTTTAACAGAACTTCAAATCGCTAAA
TTGTTGTTTCAAAATGAAGGTAAATTTGTAAATCGAACAGCTTTAATTGAAAAATGTTGGGAATCAGAGAATTATATTGA
TGATAATACTTTGGCGGTAAATATGACACGATTGCGAAAAAAATTAAGTCAAATTGGCTTAACAGATTTTATTGAAACGA
AGAAAAATGTGGGTTATAGGGTGTACATAAGATGTTACTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

97.788

0.77

Multiple sequence alignment