Detailed information NTG0633067

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: N7J25_RS10135
• Genome accession: NZ_CP104750
• Coordinates: 1990884..1991993 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264872.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain TAH 10/84 dMrvR
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1985884..1996993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7J25_RS10110 (N7J25_10110)	-	1986256..1987095 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
N7J25_RS10115 (N7J25_10115)	pgsA	1987095..1987637 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
N7J25_RS10120 (N7J25_10120)	yfmH	1987760..1989043 (-)	1284	WP_000217764.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
N7J25_RS10125 (N7J25_10125)	yfmF	1989045..1990289 (-)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
N7J25_RS10130 (N7J25_10130)	yaaA	1990528..1990881 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
N7J25_RS10135 (N7J25_10135)	recF	1990884..1991993 (+)	1110	WP_000264872.1	DNA replication/repair protein RecF	Machinery gene
N7J25_RS10140 (N7J25_10140)	-	1992005..1992871 (-)	867	WP_000398683.1	GRP family sugar transporter	-
N7J25_RS10145 (N7J25_10145)	-	1992927..1993589 (-)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
N7J25_RS10150 (N7J25_10150)	guaB	1993664..1995145 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
N7J25_RS10155 (N7J25_10155)	-	1995302..1995787 (-)	486	WP_001034427.1	arginine repressor	-
N7J25_RS10160 (N7J25_10160)	-	1995797..1996477 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42470.29 Da
• Isoelectric Point: 7.5270

>NTDB_id=633067 N7J25_RS10135 WP_000264872.1 1990884..1991993(+) (recF) [Streptococcus agalactiae strain TAH 10/84 dMrvR]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLNIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=633067 N7J25_RS10135 WP_000264872.1 1990884..1991993(+) (recF) [Streptococcus agalactiae strain TAH 10/84 dMrvR]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAAACATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGTATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447