Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   LQK05_RS09925 Genome accession   NZ_CP088157
Coordinates   1994001..1995044 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain 199     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1989001..2000044
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LQK05_RS09895 (LQK05_09895) - 1989423..1990679 (-) 1257 WP_217654526.1 aminopeptidase -
  LQK05_RS09900 (LQK05_09900) - 1990682..1990882 (-) 201 WP_000180460.1 DUF1128 family protein -
  LQK05_RS09905 (LQK05_09905) - 1991029..1991493 (+) 465 WP_000567539.1 low molecular weight protein-tyrosine-phosphatase -
  LQK05_RS09910 (LQK05_09910) - 1991500..1991775 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  LQK05_RS09915 (LQK05_09915) - 1992053..1993270 (+) 1218 WP_000037078.1 YihY/virulence factor BrkB family protein -
  LQK05_RS09920 (LQK05_09920) vraR 1993382..1994011 (-) 630 WP_000153532.1 two-component system response regulator VraR Regulator
  LQK05_RS09925 (LQK05_09925) vraS 1994001..1995044 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  LQK05_RS09930 (LQK05_09930) liaF 1995041..1995742 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  LQK05_RS09935 (LQK05_09935) - 1995757..1996143 (-) 387 WP_001110179.1 hypothetical protein -
  LQK05_RS09940 (LQK05_09940) map 1996360..1997118 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  LQK05_RS09945 (LQK05_09945) - 1997534..1998520 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  LQK05_RS09950 (LQK05_09950) - 1998951..1999364 (-) 414 WP_025175030.1 hypothetical protein -
  LQK05_RS09955 (LQK05_09955) - 1999393..1999503 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=632995 LQK05_RS09925 WP_001017131.1 1994001..1995044(-) (vraS) [Staphylococcus aureus strain 199]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=632995 LQK05_RS09925 WP_001017131.1 1994001..1995044(-) (vraS) [Staphylococcus aureus strain 199]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTAATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTGAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTGGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGTTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCGATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1