Detailed information NTG0632855

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: N7J23_RS10135
• Genome accession: NZ_CP104748
• Coordinates: 1990951..1992060 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264872.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain TAH 10/84
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1985951..1997060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7J23_RS10110 (N7J23_10110)	-	1986323..1987162 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
N7J23_RS10115 (N7J23_10115)	pgsA	1987162..1987704 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
N7J23_RS10120 (N7J23_10120)	yfmH	1987827..1989110 (-)	1284	WP_000217764.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
N7J23_RS10125 (N7J23_10125)	yfmF	1989112..1990356 (-)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
N7J23_RS10130 (N7J23_10130)	yaaA	1990595..1990948 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
N7J23_RS10135 (N7J23_10135)	recF	1990951..1992060 (+)	1110	WP_000264872.1	DNA replication/repair protein RecF	Machinery gene
N7J23_RS10140 (N7J23_10140)	-	1992072..1992938 (-)	867	WP_000398683.1	GRP family sugar transporter	-
N7J23_RS10145 (N7J23_10145)	-	1992994..1993656 (-)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
N7J23_RS10150 (N7J23_10150)	guaB	1993731..1995212 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
N7J23_RS10155 (N7J23_10155)	-	1995369..1995854 (-)	486	WP_001034427.1	arginine repressor	-
N7J23_RS10160 (N7J23_10160)	-	1995864..1996544 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42470.29 Da
• Isoelectric Point: 7.5270

>NTDB_id=632855 N7J23_RS10135 WP_000264872.1 1990951..1992060(+) (recF) [Streptococcus agalactiae strain TAH 10/84]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLNIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=632855 N7J23_RS10135 WP_000264872.1 1990951..1992060(+) (recF) [Streptococcus agalactiae strain TAH 10/84]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAAACATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGTATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447