Detailed information NTG0632676

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: N5P16_RS16355
• Genome accession: NZ_CP104734
• Coordinates: 3510418..3511728 (-)
• Length: 436 a.a.
• NCBI ID: WP_004920068.1
• Uniprot ID: Q6FEP7
• Organism: Acinetobacter baylyi strain JAT2044
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3505418..3516728

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5P16_RS16335 (N5P16_16335)	-	3506490..3507098 (-)	609	WP_004920055.1	class I SAM-dependent methyltransferase	-
N5P16_RS16340 (N5P16_16340)	-	3507260..3508786 (+)	1527	WP_004920057.1	fumarate hydratase	-
N5P16_RS16345 (N5P16_16345)	-	3508934..3509497 (+)	564	WP_004920060.1	DUF2059 domain-containing protein	-
N5P16_RS16350 (N5P16_16350)	-	3509558..3510271 (-)	714	WP_004920064.1	DUF2846 domain-containing protein	-
N5P16_RS16355 (N5P16_16355)	clpX	3510418..3511728 (-)	1311	WP_004920068.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
N5P16_RS16360 (N5P16_16360)	clpP	3511757..3512362 (-)	606	WP_004920069.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
N5P16_RS16365 (N5P16_16365)	tig	3512555..3513889 (-)	1335	WP_004920071.1	trigger factor	-
N5P16_RS16370 (N5P16_16370)	-	3514250..3516445 (+)	2196	WP_004920073.1	TonB-dependent receptor	-

Sequence

Protein

• Length: 436 a.a.
• Molecular weight: 48181.05 Da
• Isoelectric Point: 5.8371

>NTDB_id=632676 N5P16_RS16355 WP_004920068.1 3510418..3511728(-) (clpX) [Acinetobacter baylyi strain JAT2044]
MSEHPQGQKHCSFCGKSQAEVGKLIAGENAYICNECVDVCLDLVQTSQQVEAGDWASRDLPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKAGQSGHVSKHEVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVEN
IVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDT
SNILFICGGAFAGLEKIVQQRHEKGGIGFNAEVKKKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEAA
LMQILTEPKNALTRQYQSLFQMENVDLVFEESALRAIAKKALERNTGARGLRSIMENVLLETMYDLPSRKDIGTVVVNEA
VIRGEAEPEYKKEHTQKKDTHEHNVADLKVIDSKSA

Nucleotide

• Length: 1311 bp

>NTDB_id=632676 N5P16_RS16355 WP_004920068.1 3510418..3511728(-) (clpX) [Acinetobacter baylyi strain JAT2044]
ATGTCCGAACATCCTCAAGGACAAAAACACTGTTCATTTTGCGGTAAATCTCAGGCTGAAGTCGGAAAACTGATCGCAGG
CGAAAACGCTTATATTTGTAATGAATGTGTGGATGTGTGCTTGGATCTTGTTCAAACTAGCCAGCAAGTTGAAGCAGGGG
ATTGGGCAAGTCGAGATTTGCCAAAACCTCATGAAATTCGGGCGGCTTTAGATCAATATGTGATTGGTCAAGATCTGGCA
AAGAAAACGCTATCTGTTGCAGTGTATAACCATTACAAGCGTTTAAAGGCTGGTCAGTCTGGACATGTATCCAAGCACGA
AGTTGAAATTGCAAAAAGTAATATTTTACTGATTGGGCCAACGGGTTCAGGTAAGACTTTATTGGCACAGACGTTGGCGC
GTCTACTGGATGTGCCATTTGCAATGGCTGATGCCACCACACTGACCGAAGCAGGTTATGTGGGTGAAGATGTTGAAAAC
ATTGTACAGAAGCTTTTACAAAAAGCAGATTACGATGTTGAGAAAGCACAGAAAGGGATTATTTATATCGATGAGATCGA
TAAAATTACCCGCAAATCTGAAAATCCATCAATTACCCGTGACGTATCTGGCGAAGGCGTGCAACAGGCGCTATTGAAGA
TGATCGAAGGCACAGTTGCTTCGATTCCGCCACAAGGTGGTCGTAAGCATCCGCAGCAGGAATTTATTCAGATCGATACT
TCGAACATTCTGTTTATCTGTGGTGGTGCTTTTGCTGGTCTTGAAAAGATTGTTCAGCAGCGTCATGAAAAAGGTGGTAT
TGGTTTCAATGCCGAAGTGAAAAAGAAAGACGAAACCAAAAAGCTGGCTGAATTGTTCCGTCAGGTTGAGCCAACCGATT
TGGTGAAATTTGGATTAATTCCAGAGTTTATTGGTCGTCTGCCTGTTATTGCGACGCTTGAAGAGCTAGATGAAGCAGCA
TTGATGCAGATTCTAACTGAACCAAAAAATGCTTTAACGCGTCAATACCAGTCATTATTTCAAATGGAAAATGTTGATCT
GGTGTTTGAAGAGTCTGCATTACGAGCGATTGCCAAGAAAGCACTTGAGCGGAATACAGGGGCACGTGGTTTGCGCTCAA
TCATGGAAAATGTATTGCTTGAAACCATGTATGATTTGCCAAGCCGTAAGGATATTGGCACTGTCGTGGTGAATGAAGCT
GTGATTCGTGGTGAAGCAGAACCCGAGTACAAGAAAGAGCATACTCAAAAAAAAGATACCCATGAACATAACGTTGCTGA
TTTAAAGGTCATTGATTCTAAATCTGCATAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-392)

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

3D structure

• AlphaFold DB: Q6FEP7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.75	91.743	0.548
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.75	91.743	0.521