Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   N5P16_RS12450 Genome accession   NZ_CP104734
Coordinates   2668840..2670315 (+) Length   491 a.a.
NCBI ID   WP_004925683.1    Uniprot ID   Q6FCH6
Organism   Acinetobacter baylyi strain JAT2044     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 2663840..2675315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5P16_RS12425 (N5P16_12425) uppS 2663892..2664641 (-) 750 WP_004925666.1 polyprenyl diphosphate synthase -
  N5P16_RS12430 (N5P16_12430) frr 2664646..2665200 (-) 555 WP_004925669.1 ribosome recycling factor -
  N5P16_RS12435 (N5P16_12435) pyrH 2665280..2666008 (-) 729 WP_004925672.1 UMP kinase -
  N5P16_RS12440 (N5P16_12440) rimO 2666061..2667404 (-) 1344 WP_004925675.1 30S ribosomal protein S12 methylthiotransferase RimO -
  N5P16_RS12445 (N5P16_12445) glnL 2667744..2668853 (+) 1110 WP_011182272.1 nitrogen regulation protein NR(II) -
  N5P16_RS12450 (N5P16_12450) luxO 2668840..2670315 (+) 1476 WP_004925683.1 nitrogen regulation protein NR(I) Regulator
  N5P16_RS12455 (N5P16_12455) - 2670463..2671119 (+) 657 WP_004925686.1 TetR/AcrR family transcriptional regulator -
  N5P16_RS12460 (N5P16_12460) argF 2671220..2672140 (+) 921 WP_004925687.1 ornithine carbamoyltransferase -
  N5P16_RS12465 (N5P16_12465) - 2672303..2673202 (+) 900 WP_011182271.1 alpha/beta hydrolase -
  N5P16_RS12470 (N5P16_12470) - 2673205..2673564 (-) 360 WP_004925694.1 YnfA family protein -

Sequence

Protein


Download         Length: 491 a.a.        Molecular weight: 55327.05 Da        Isoelectric Point: 5.8629

>NTDB_id=632658 N5P16_RS12450 WP_004925683.1 2668840..2670315(+) (luxO) [Acinetobacter baylyi strain JAT2044]
MSRNKIWVIDDDRAMRWVLEKTFKEEGFDVTSFEEAQSALDQLLDDAPDVILTDIRMPGIDGLTFLGKVKNNYPDLPVII
MTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAILHINKLQQQEATKAASAAQSTEIIGESPAMQEVFRAIGRLS
QSHITVLINGESGTGKELVAHALHKHSPRSSKPFIALNMAAIPKDLIETELFGHEKGAFTGANTQRQGRFEQANGGTLFL
DEIGDMPFETQTRLLRVLADGEFYRVGGHIPVKVDVRIVAATHQDLEKLVNEGRFREDLYHRLNVIRIHIPKLAHRSEDI
PMLAQHFLARAGKELGVSPKILRTETTDYMQQLPWPGNVRQLENTCRWLTVMITGREVYPEDLPSELKQIPIQKSVDQTG
TPPSFDRISLHHWDELLGQWAIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGIS
AEDDTEEESEI

Nucleotide


Download         Length: 1476 bp        

>NTDB_id=632658 N5P16_RS12450 WP_004925683.1 2668840..2670315(+) (luxO) [Acinetobacter baylyi strain JAT2044]
ATGTCGCGAAATAAAATATGGGTAATTGATGATGATCGCGCCATGCGCTGGGTCTTGGAAAAAACCTTTAAAGAAGAAGG
CTTTGATGTTACAAGTTTCGAAGAGGCACAATCCGCGCTTGATCAGCTTTTGGACGATGCACCAGACGTAATCTTAACTG
ATATTCGTATGCCAGGTATCGATGGTTTAACTTTTCTAGGAAAAGTTAAAAATAACTATCCTGATTTGCCTGTCATCATC
ATGACTGCTCACTCAGATCTTGAATCCGCGGTCTCTAGCTATCAGACAGGTGCTTTTGAGTATTTACCTAAACCATTTGA
CATTGATGAAGCGCTGGCTTTAGTTAATCGTGCGATCCTGCATATTAATAAACTTCAACAGCAAGAAGCCACCAAAGCAG
CTTCTGCGGCACAATCAACTGAAATTATTGGTGAATCTCCTGCCATGCAGGAAGTATTCAGAGCGATTGGGCGTTTATCA
CAATCTCATATCACCGTACTTATTAATGGTGAATCAGGTACAGGTAAAGAACTGGTTGCGCATGCCTTACATAAGCATTC
TCCGCGCAGCAGTAAGCCGTTTATCGCGCTCAACATGGCAGCAATTCCAAAAGACCTGATTGAAACTGAACTGTTCGGTC
ACGAGAAAGGTGCTTTTACTGGTGCAAATACTCAACGTCAGGGTCGTTTTGAGCAAGCCAATGGCGGCACATTATTTTTA
GATGAAATTGGCGATATGCCTTTTGAAACACAAACACGTTTATTACGTGTATTGGCAGATGGTGAGTTTTATCGTGTAGG
TGGACATATTCCTGTTAAGGTTGATGTTCGAATTGTGGCTGCAACGCATCAAGATCTCGAAAAACTGGTGAATGAAGGCC
GATTCCGTGAAGACTTGTACCATCGTCTAAACGTGATCCGAATCCATATTCCGAAGCTCGCTCACCGTAGCGAAGACATC
CCAATGCTAGCACAACACTTTCTAGCACGCGCGGGCAAAGAACTGGGTGTAAGTCCTAAAATTTTGCGGACAGAAACCAC
TGATTATATGCAACAGCTCCCTTGGCCAGGGAATGTACGCCAACTAGAAAATACATGTCGATGGCTAACGGTAATGATTA
CGGGACGAGAAGTCTATCCTGAAGATCTCCCTTCAGAACTCAAACAGATTCCAATTCAGAAATCTGTGGATCAGACAGGT
ACACCGCCAAGCTTTGATCGTATTTCATTGCATCATTGGGATGAGCTACTTGGACAATGGGCTATTCAAAAACTTAAAAA
TGGTGAAATGAAAATTTTGGATATCGCCACTCCTATGTTTGAGCGTACTTTGATCAATGCTGCGCTTCAACAAACGCGTG
GACGCAAACGTCATGCAGCCGAACTTCTCGGTTGGGGACGCAATACACTTACTCGGAAATTAAAAGAACTTGGTATCAGC
GCAGAAGATGATACTGAAGAAGAAAGTGAAATTTAA

Domains

Predicted by InterProScan.

Bacterial regulatory protein, Fis family (HTH_8)

(439-477)

Response regulator receiver domain (Response_reg)

(6-115)

Sigma-54 interaction domain (Sigma54_activat)

(142-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q6FCH6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

40.222

91.65

0.369
  pilR Pseudomonas aeruginosa PAK

37.161

97.556

0.363