Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LQF05_RS01350 Genome accession   NZ_CP088004
Coordinates   301284..301691 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain SB-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 296284..306691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LQF05_RS01320 (LQF05_01320) - 296453..297469 (-) 1017 WP_236451263.1 aspartate carbamoyltransferase catalytic subunit -
  LQF05_RS01325 (LQF05_01325) pyrR 297523..298038 (-) 516 WP_011914963.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  LQF05_RS01330 (LQF05_01330) ruvX 298056..298484 (-) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  LQF05_RS01335 (LQF05_01335) - 298481..299050 (-) 570 WP_053528280.1 YqgE/AlgH family protein -
  LQF05_RS01340 (LQF05_01340) - 299116..300009 (-) 894 WP_019405529.1 energy transducer TonB -
  LQF05_RS01345 (LQF05_01345) gshB 300097..301047 (-) 951 WP_013984318.1 glutathione synthase -
  LQF05_RS01350 (LQF05_01350) pilG 301284..301691 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  LQF05_RS01355 (LQF05_01355) pilH 301736..302101 (+) 366 WP_003297216.1 twitching motility response regulator PilH -
  LQF05_RS01360 (LQF05_01360) - 302143..302679 (+) 537 WP_013984316.1 chemotaxis protein CheW -
  LQF05_RS01365 (LQF05_01365) - 302758..304806 (+) 2049 WP_270067274.1 methyl-accepting chemotaxis protein -
  LQF05_RS01370 (LQF05_01370) - 304867..305733 (+) 867 WP_026012435.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=632286 LQF05_RS01350 WP_003282729.1 301284..301691(+) (pilG) [Stutzerimonas stutzeri strain SB-1]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=632286 LQF05_RS01350 WP_003282729.1 301284..301691(+) (pilG) [Stutzerimonas stutzeri strain SB-1]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4