Detailed information NTG0631171

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: N5877_RS14675
• Genome accession: NZ_CP104586
• Coordinates: 3167574..3168599 (-)
• Length: 341 a.a.
• NCBI ID: WP_019725668.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain WTJH6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3162574..3173599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5877_RS14650 (N5877_14650)	aroE	3162776..3163600 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
N5877_RS14655 (N5877_14655)	hemF	3163658..3164575 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
N5877_RS14660 (N5877_14660)	-	3164766..3165743 (+)	978	WP_016561458.1	NADPH:quinone reductase	-
N5877_RS14665 (N5877_14665)	-	3165753..3166310 (-)	558	WP_016561457.1	L-threonylcarbamoyladenylate synthase	-
N5877_RS14670 (N5877_14670)	dprA	3166351..3167439 (-)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
N5877_RS14675 (N5877_14675)	tsaP	3167574..3168599 (-)	1026	WP_019725668.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
N5877_RS14680 (N5877_14680)	def	3168738..3169244 (+)	507	WP_003107059.1	peptide deformylase	-
N5877_RS14685 (N5877_14685)	fmt	3169299..3170243 (+)	945	WP_019725667.1	methionyl-tRNA formyltransferase	-
N5877_RS14690 (N5877_14690)	rsmB	3170240..3171544 (+)	1305	WP_016561456.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
N5877_RS14695 (N5877_14695)	trkA	3171572..3172945 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
N5877_RS14700 (N5877_14700)	-	3173094..3173411 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37555.98 Da
• Isoelectric Point: 9.3358

>NTDB_id=631171 N5877_RS14675 WP_019725668.1 3167574..3168599(-) (tsaP) [Pseudomonas aeruginosa strain WTJH6]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDALSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=631171 N5877_RS14675 WP_019725668.1 3167574..3168599(-) (tsaP) [Pseudomonas aeruginosa strain WTJH6]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACGCCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393