Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   N4T05_RS06660 Genome accession   NZ_CP104559
Coordinates   1359582..1360205 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain SA2107     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1354582..1365205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N4T05_RS06635 (N4T05_06635) rpmG 1356159..1356308 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  N4T05_RS06640 (N4T05_06640) rpsN 1356761..1357030 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  N4T05_RS06645 (N4T05_06645) guaC 1357187..1358164 (+) 978 WP_103215305.1 GMP reductase -
  N4T05_RS06655 (N4T05_06655) - 1358186..1359202 (+) 1017 WP_169428106.1 CAP domain-containing protein -
  N4T05_RS06660 (N4T05_06660) dinR/lexA 1359582..1360205 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  N4T05_RS06665 (N4T05_06665) sosA 1360348..1360581 (+) 234 WP_000499648.1 DNA damage-induced cell division inhibitor SosA -
  N4T05_RS06670 (N4T05_06670) - 1360717..1360956 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  N4T05_RS06675 (N4T05_06675) recP/tkt 1361077..1363065 (+) 1989 WP_234739872.1 transketolase Machinery gene
  N4T05_RS06680 (N4T05_06680) - 1363343..1363585 (+) 243 WP_000246909.1 YneF family protein -
  N4T05_RS06685 (N4T05_06685) - 1363572..1363670 (+) 99 WP_001789897.1 hypothetical protein -
  N4T05_RS06690 (N4T05_06690) - 1363764..1364231 (+) 468 WP_000966144.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=630892 N4T05_RS06660 WP_001208755.1 1359582..1360205(-) (dinR/lexA) [Staphylococcus aureus strain SA2107]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=630892 N4T05_RS06660 WP_001208755.1 1359582..1360205(-) (dinR/lexA) [Staphylococcus aureus strain SA2107]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGAGAAATTGGAGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGCGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAGGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657