Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   N596_RS04310 Genome accession   NC_022584
Coordinates   890447..891256 (-) Length   269 a.a.
NCBI ID   WP_023027096.1    Uniprot ID   -
Organism   Streptococcus ilei     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 885447..896256
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N596_RS04295 (N596_04435) smc 885450..888995 (-) 3546 WP_023027094.1 chromosome segregation protein SMC -
  N596_RS04300 (N596_04440) rnc 888986..889687 (-) 702 WP_042361176.1 ribonuclease III -
  N596_RS04305 (N596_04445) - 889846..890235 (-) 390 WP_373364506.1 YbaN family protein -
  N596_RS04310 (N596_04450) vicX 890447..891256 (-) 810 WP_023027096.1 MBL fold metallo-hydrolase Regulator
  N596_RS04315 (N596_04455) micB 891265..892611 (-) 1347 WP_023027097.1 cell wall metabolism sensor histidine kinase VicK Regulator
  N596_RS04320 (N596_04460) micA 892604..893305 (-) 702 WP_023027098.1 response regulator YycF Regulator
  N596_RS04325 (N596_04465) thrS 893677..895620 (-) 1944 WP_023027099.1 threonine--tRNA ligase -
  N596_RS10415 - 895653..895842 (-) 190 Protein_858 hypothetical protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29730.70 Da        Isoelectric Point: 5.7538

>NTDB_id=62951 N596_RS04310 WP_023027096.1 890447..891256(-) (vicX) [Streptococcus ilei]
MDEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEATWKAMEGSKYLGKIDDSQKHLFEMGKTLTFGDLDVESFGVSHDAAAPQFYRFMKDGKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNKTKKIYLGHLSKENNIKELAHMTMVN
QLARADLAVGHDFDVLDTSPDTATPLVDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=62951 N596_RS04310 WP_023027096.1 890447..891256(-) (vicX) [Streptococcus ilei]
ATGGATGAAAAAGGGTTTAAGTATAGTATTTTGGCTTCAGGATCGAGTGGTAATTCATTTTACCTAGAGACACCTAAGAA
AAAAATTCTAGTAGATGCAGGCTTGTCCGGGAAGAAGATTACAGGTTTGCTTGCAGAAATTGATCGCAAACCCGAAGATC
TTGATGCTATTTTGATTACACATGAACATTCGGATCACATTCATGGCGTTGGTGTACTCGCTCGTAAATACGGGATGGAC
CTATACGCCAATGAAGCTACATGGAAGGCCATGGAGGGAAGCAAGTACCTTGGGAAGATCGATGACTCCCAGAAACATCT
TTTTGAGATGGGCAAGACCTTAACCTTTGGGGATTTGGATGTGGAAAGTTTTGGTGTCAGCCATGATGCTGCGGCTCCAC
AGTTCTATCGTTTCATGAAGGATGGAAAGAGTTTCGTCATGCTGACAGATACAGGTTATGTTAGCGATCGGATGGCAGGA
ATTGTTGAAAATGCTGATGGCTATTTGATTGAGTCCAACCATGATGTGGAAATCCTACGGGCAGGCTCTTACGCCTGGAG
ATTAAAGCAACGGATCTTATCCGATTTGGGTCACCTCTCTAATGAAGATGGTGCCGATGCCATGATTCGGACCCTAGGCA
ATAAGACCAAGAAAATTTATCTAGGCCACTTATCTAAGGAAAACAATATCAAGGAATTGGCCCATATGACCATGGTCAAT
CAATTGGCTCGAGCAGATCTAGCAGTGGGGCATGATTTTGACGTCTTGGATACATCTCCAGATACAGCGACTCCATTAGT
AGATATCTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.439

100

0.784

Multiple sequence alignment