Detailed information NTG0062948

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: N596_RS02620
• Genome accession: NC_022584
• Coordinates: 518965..520197 (-)
• Length: 410 a.a.
• NCBI ID: WP_023026848.1
• Uniprot ID: -
• Organism: Streptococcus ilei
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 513965..525197

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N596_RS02590 (N596_02670)	-	514402..514854 (-)	453	WP_023023308.1	hypothetical protein	-
N596_RS02595 (N596_02680)	rplL	515341..515709 (-)	369	WP_001196965.1	50S ribosomal protein L7/L12	-
N596_RS02600 (N596_02685)	rplJ	515786..516286 (-)	501	WP_006596316.1	50S ribosomal protein L10	-
N596_RS02605 (N596_02690)	-	516524..517321 (-)	798	WP_023023311.1	formate/nitrite transporter family protein	-
N596_RS02610 (N596_02695)	-	517512..518210 (-)	699	WP_023026847.1	glucosaminidase domain-containing protein	-
N596_RS02615 (N596_02700)	yihA	518357..518953 (-)	597	WP_023023313.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
N596_RS02620 (N596_02705)	clpX	518965..520197 (-)	1233	WP_023026848.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
N596_RS02630 (N596_02715)	-	520408..520920 (-)	513	WP_023023315.1	dihydrofolate reductase	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 45571.01 Da
• Isoelectric Point: 4.3434

>NTDB_id=62948 N596_RS02620 WP_023026848.1 518965..520197(-) (clpX) [Streptococcus ilei]
MPTNQSNDMMVYCSFCGKNQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHENREDDNDVDLQKSNILMVGPTGSGKTFLAQTLAKSLNVPFAIADATALTEASYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNKAIDESSSYMQEIIAEDIQKFGIIPELIGRLPVLAALEQLTVDDLVR
ILKEPRNALVKQYQALLSFDDVELEFDDEALEEIASKAIERKTGARGLRSIIEETMLDVMFEVPSQEDVKMVRITKEAVN
GTEKPILETA

Nucleotide

• Length: 1233 bp

>NTDB_id=62948 N596_RS02620 WP_023026848.1 518965..520197(-) (clpX) [Streptococcus ilei]
ATGCCTACAAATCAATCAAACGATATGATGGTTTATTGTTCGTTTTGTGGTAAGAACCAAGACGAAGTACAGAAGATTAT
TGCTGGGAACAATGCCTTTATCTGTAATGAATGTGTTGAGTTAGCTCAAGAAATCATTCGAGAAGAATTAGCTGAGGAAG
TCTTGGCAGACCTTTCAGAGGTTCCAAAACCAATCGAACTTCTCAATATCCTTAACCACTATGTCATCGGTCAAGATCGT
GCTAAACGAGCACTAGCAGTAGCTGTCTACAATCACTACAAACGGATTAACTTCCACGAAAATCGTGAAGATGACAACGA
TGTGGATCTACAAAAATCAAACATTTTGATGGTCGGTCCTACAGGTTCAGGAAAAACTTTCTTAGCTCAAACGCTTGCTA
AGAGTTTAAATGTGCCATTTGCCATCGCCGATGCAACAGCCTTGACAGAAGCGAGTTACGTCGGAGAAGACGTTGAGAAC
ATCCTTCTTAAGCTCTTGCAAGCAGCTGATTTCAATATCGAACGTGCTGAGCGAGGCATCATCTATGTTGATGAAATCGA
TAAGATTGCCAAGAAGAGTGAGAACGTCTCGATTACTCGTGATGTATCTGGTGAAGGGGTACAGCAAGCCCTCTTGAAGA
TCATCGAGGGTACTGTAGCGAGTGTTCCACCTCAAGGCGGACGCAAGCATCCTCAACAAGAGATGATCCAAGTTGACACC
AAAAACATTCTTTTCATCGTTGGTGGAGCCTTTGATGGAATTGAAGAAATTGTGAAACAACGTCTAGGTGAAAAGATTAT
TGGGTTTGGTCAAAACAACAAAGCCATTGATGAATCCAGCTCTTACATGCAAGAAATCATTGCAGAAGATATCCAAAAAT
TCGGTATTATTCCTGAGTTAATCGGTCGTCTTCCAGTTCTTGCTGCATTAGAGCAATTGACAGTGGATGACTTGGTTCGT
ATTTTGAAAGAACCAAGAAATGCCTTGGTGAAACAATATCAGGCTCTCTTATCCTTCGATGATGTTGAATTAGAATTTGA
TGACGAAGCGCTAGAAGAAATTGCAAGTAAAGCCATTGAACGCAAGACTGGTGCTCGCGGACTACGCTCCATCATCGAAG
AAACTATGTTGGATGTGATGTTTGAAGTTCCAAGTCAAGAAGACGTCAAAATGGTTCGGATCACCAAAGAAGCAGTTAAC
GGAACTGAAAAACCAATTTTAGAAACTGCCTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (313-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	87.317	100	0.873
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.96	98.049	0.568