Detailed information NTG0062911

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: N597_RS04340
• Genome accession: NC_022582
• Coordinates: 869528..870760 (-)
• Length: 410 a.a.
• NCBI ID: WP_023023314.1
• Uniprot ID: A0A7X3AWQ0
• Organism: Streptococcus ilei
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 864528..875760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N597_RS04310 (N597_04455)	-	864929..865381 (-)	453	WP_023023308.1	hypothetical protein	-
N597_RS04315 (N597_04460)	rplL	865903..866271 (-)	369	WP_001196965.1	50S ribosomal protein L7/L12	-
N597_RS04320 (N597_04465)	rplJ	866348..866848 (-)	501	WP_006596316.1	50S ribosomal protein L10	-
N597_RS04325 (N597_04470)	-	867086..867883 (-)	798	WP_023023311.1	formate/nitrite transporter family protein	-
N597_RS04330 (N597_04475)	-	868074..868724 (-)	651	WP_398575118.1	glucosaminidase domain-containing protein	-
N597_RS04335 (N597_04480)	yihA	868920..869516 (-)	597	WP_023023313.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
N597_RS04340 (N597_04485)	clpX	869528..870760 (-)	1233	WP_023023314.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
N597_RS04350 (N597_04495)	-	870971..871483 (-)	513	WP_023023315.1	dihydrofolate reductase	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 45540.99 Da
• Isoelectric Point: 4.3434

>NTDB_id=62911 N597_RS04340 WP_023023314.1 869528..870760(-) (clpX) [Streptococcus ilei]
MPTNQSNDMMVYCSFCGKNQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHENREDDNDVDLQKSNILMVGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNKAIDESSSYMQEIIAEDIQKFGIIPELIGRLPVLAALEQLTVDDLVR
ILKEPRNALVKQYQALLSFDDVELEFDDEALEEIASKAIERKTGARGLRSIIEETMLDVMFEVPSQEDVKMVRITKEAVN
GTEKPILETA

Nucleotide

• Length: 1233 bp

>NTDB_id=62911 N597_RS04340 WP_023023314.1 869528..870760(-) (clpX) [Streptococcus ilei]
ATGCCTACAAATCAATCAAACGATATGATGGTTTATTGTTCGTTTTGTGGTAAGAACCAAGACGAAGTACAGAAGATTAT
TGCTGGGAACAATGCCTTTATCTGTAATGAATGTGTTGAGTTAGCTCAAGAAATCATTCGAGAAGAATTAGCTGAGGAAG
TCTTGGCAGACCTTTCAGAGGTTCCAAAACCAATCGAACTTCTCAATATCCTTAACCACTATGTCATCGGTCAAGATCGT
GCTAAACGAGCACTAGCAGTAGCTGTCTACAATCACTACAAACGGATTAACTTCCACGAAAATCGTGAAGATGACAACGA
TGTGGATCTACAAAAATCAAACATTTTGATGGTCGGTCCTACAGGTTCAGGAAAAACTTTCTTAGCTCAAACGCTTGCTA
AGAGTTTAAATGTGCCATTTGCCATCGCCGATGCAACAGCCTTGACAGAAGCGGGTTACGTCGGAGAAGACGTTGAGAAC
ATCCTTCTTAAGCTCTTGCAAGCAGCTGATTTCAATATCGAACGTGCTGAGCGAGGCATCATCTATGTTGATGAAATCGA
TAAGATTGCCAAGAAGAGTGAGAACGTCTCGATTACTCGTGATGTATCTGGTGAAGGGGTACAGCAAGCCCTCTTGAAGA
TCATCGAGGGTACTGTAGCGAGTGTTCCACCTCAAGGCGGACGCAAGCATCCTCAACAAGAGATGATCCAAGTTGACACC
AAAAACATTCTTTTCATCGTTGGTGGAGCCTTTGATGGAATTGAAGAAATTGTGAAACAACGTCTAGGTGAAAAGATTAT
TGGGTTTGGTCAAAACAACAAAGCCATTGATGAATCCAGCTCTTACATGCAAGAAATCATTGCAGAAGATATCCAAAAAT
TCGGTATTATTCCTGAGTTAATCGGTCGTCTTCCAGTTCTTGCTGCATTAGAGCAATTGACAGTGGATGACTTGGTTCGT
ATTTTGAAAGAACCAAGAAATGCCTTGGTGAAACAATATCAGGCTCTCTTATCCTTCGATGATGTTGAATTAGAATTTGA
TGACGAAGCGCTAGAAGAAATTGCAAGTAAAGCCATTGAACGCAAGACTGGTGCTCGCGGACTACGCTCCATCATCGAAG
AAACTATGTTGGATGTGATGTTTGAAGTTCCAAGTCAAGAAGACGTCAAAATGGTTCGGATCACCAAAGAAGCAGTTAAC
GGAACTGAAAAACCAATTTTAGAAACTGCCTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (313-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-306)

3D structure

• AlphaFold DB: A0A7X3AWQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	87.561	100	0.876
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.209	98.049	0.571