Detailed information NTG0629084

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N4502_RS15390
• Genome accession: NZ_CP104371
• Coordinates: 3182990..3184015 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2021CK-01784
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3177990..3189015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4502_RS15360 (N4502_15360)	zapB	3178074..3178319 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
N4502_RS15365 (N4502_15365)	rraA	3178404..3178889 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N4502_RS15370 (N4502_15370)	menA	3178982..3179908 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N4502_RS15375 (N4502_15375)	hslU	3179975..3181306 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
N4502_RS15380 (N4502_15380)	hslV	3181316..3181846 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N4502_RS15385 (N4502_15385)	ftsN	3181939..3182898 (-)	960	WP_000068828.1	cell division protein FtsN	-
N4502_RS15390 (N4502_15390)	cytR	3182990..3184015 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
N4502_RS15395 (N4502_15395)	priA	3184171..3186369 (-)	2199	WP_001306641.1	primosomal protein N'	Machinery gene
N4502_RS15400 (N4502_15400)	rpmE	3186572..3186784 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
N4502_RS15405 (N4502_15405)	yiiX	3186845..3187453 (-)	609	WP_000702300.1	YiiX family permuted papain-like enzyme	-
N4502_RS15410 (N4502_15410)	metJ	3187513..3187830 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=629084 N4502_RS15390 WP_000644904.1 3182990..3184015(-) (cytR) [Escherichia coli strain 2021CK-01784]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=629084 N4502_RS15390 WP_000644904.1 3182990..3184015(-) (cytR) [Escherichia coli strain 2021CK-01784]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGTTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628