Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   N4T40_RS11885 Genome accession   NZ_CP104335
Coordinates   2439319..2440260 (+) Length   313 a.a.
NCBI ID   WP_001159458.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 2021CK-01408     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2434319..2445260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N4T40_RS11875 (N4T40_11875) basA 2434739..2436586 (+) 1848 WP_000910261.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  N4T40_RS11880 (N4T40_11880) basB 2436657..2438687 (-) 2031 WP_079746264.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  N4T40_RS11885 (N4T40_11885) ceuB 2439319..2440260 (+) 942 WP_001159458.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  N4T40_RS11890 (N4T40_11890) bauC 2440260..2441207 (+) 948 WP_001223283.1 ferric acinetobactin ABC transporter permease subunit BauC -
  N4T40_RS11895 (N4T40_11895) bauE 2441204..2441974 (+) 771 WP_000582120.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  N4T40_RS11900 (N4T40_11900) bauB 2441981..2442949 (+) 969 WP_001104123.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33965.00 Da        Isoelectric Point: 8.4665

>NTDB_id=628470 N4T40_RS11885 WP_001159458.1 2439319..2440260(+) (ceuB) [Acinetobacter baumannii strain 2021CK-01408]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=628470 N4T40_RS11885 WP_001159458.1 2439319..2440260(+) (ceuB) [Acinetobacter baumannii strain 2021CK-01408]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGTTCGTTATTGCTGGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTTCTTA
CCGGTATCGGATTGGCGGTATGTGGCGTCATCTTGCAGCACATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCAGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACATCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCGTCTCTATTACTAGTTTGCGACATTCTTGGTCGCTCCATTATTTATCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422