Detailed information NTG0627983

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LOY66_RS20720
• Genome accession: NZ_CP087200
• Coordinates: 4761199..4763445 (-)
• Length: 748 a.a.
• NCBI ID: WP_256453545.1
• Uniprot ID: -
• Organism: Pseudomonas viciae strain B21-062
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4756199..4768445

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOY66_RS20685 (LOY66_20665)	murB	4756582..4757601 (-)	1020	WP_265072291.1	UDP-N-acetylmuramate dehydrogenase	-
LOY66_RS20690 (LOY66_20670)	-	4757598..4758062 (-)	465	WP_135846480.1	low molecular weight protein-tyrosine-phosphatase	-
LOY66_RS20695 (LOY66_20675)	kdsB	4758062..4758826 (-)	765	WP_265072292.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LOY66_RS20700 (LOY66_20680)	-	4758823..4759008 (-)	186	WP_003179363.1	Trm112 family protein	-
LOY66_RS20705 (LOY66_20685)	lpxK	4759032..4760042 (-)	1011	WP_265072293.1	tetraacyldisaccharide 4'-kinase	-
LOY66_RS20710 (LOY66_20690)	-	4760042..4760470 (-)	429	WP_135846483.1	biopolymer transporter ExbD	-
LOY66_RS20715 (LOY66_20695)	exbB	4760467..4761102 (-)	636	WP_178084272.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
LOY66_RS20720 (LOY66_20700)	comA	4761199..4763445 (-)	2247	WP_256453545.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LOY66_RS20725 (LOY66_20705)	-	4763591..4764106 (+)	516	WP_135846486.1	DUF2062 domain-containing protein	-
LOY66_RS20730 (LOY66_20710)	-	4764271..4765050 (-)	780	WP_135846487.1	ABC transporter permease	-
LOY66_RS20735 (LOY66_20715)	-	4765047..4765979 (-)	933	WP_135846488.1	ABC transporter ATP-binding protein	-
LOY66_RS20740 (LOY66_20720)	-	4766113..4766736 (-)	624	WP_135846489.1	glutathione S-transferase family protein	-
LOY66_RS20745 (LOY66_20725)	-	4766781..4767440 (-)	660	WP_135846490.1	transglutaminase family protein	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 81203.27 Da
• Isoelectric Point: 10.2037

>NTDB_id=627983 LOY66_RS20720 WP_256453545.1 4761199..4763445(-) (comA) [Pseudomonas viciae strain B21-062]
MRTGLVALALGLLAPVFLPALPPFWLIATMPVLGLMVLPFRTYPLGFFLFGLAWACLSAQLALADRLPAALDGETRWVEG
RVVGLPQHSEDVVRFELADARSRRTRLPTSMRLAWFGGPPVSSGERWRLAVKLKRPAGLLNPHGFDYEAWLLSRGIGATG
TVKDGLRLQAAQGAWRDGVRQALAQVDAHGRSGALAALVLGDGSGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
VAGAARYGLWPVGLPWLPWACALAFAAALGYGLLAGFEVPVRRACAMIGLVLLWRLRFKHPDPWWAWLLAFVGVLVFDPL
ASLRPGFWLSFAAVAILMFTFGARLGPWRWWQTWTRAQWLVALGLCPLLVILGLPVSLSGPLVNLLAVPWISLLVLPPAL
LGTALLPVPLLGEGLLWIAGGLLDWLFKGLALVAGRMPAWVPVSIPLWAWCIAALGAFLLLLPKGVPLRVLGWPMLLLMV
FPPRESVPQGHAEIWHLDVGQGLAVLVRTRRHSLLYDAGPRFGEADAGERVVLPTLRKLGVQALDLMLLSHADADHAGGA
RAVRSGLPTRRVISGDPAALPDELQAGACDSGEGWEWDGVRFQLWQWSAARESNQKSCVLLVEAGGERLLLTGDIDSHAE
QALLDGPLAAPSQWLAAPHHGSRSSSSMALLARLNPHSVLISRGQGNAFGHPHPRVIARYRRLGLAIYDSAEQGAIRLQL
GAFEPPFTQARQRRYWRDPPPVGPQAKH

Nucleotide

• Length: 2247 bp

>NTDB_id=627983 LOY66_RS20720 WP_256453545.1 4761199..4763445(-) (comA) [Pseudomonas viciae strain B21-062]
ATGCGCACAGGGTTGGTCGCGCTTGCACTGGGGCTGTTGGCCCCGGTTTTTTTACCGGCATTGCCGCCGTTTTGGCTGAT
TGCAACCATGCCGGTGCTGGGGTTGATGGTGTTGCCGTTTCGCACCTACCCGCTGGGTTTTTTTCTGTTCGGGTTGGCCT
GGGCCTGCCTGTCGGCGCAGTTGGCATTGGCCGACCGGTTGCCTGCCGCGCTCGATGGCGAAACCCGCTGGGTCGAAGGG
CGTGTCGTCGGCTTGCCGCAGCACAGCGAGGACGTGGTGCGTTTCGAACTGGCCGATGCCCGTTCGCGTCGCACCCGGCT
ACCGACGTCGATGCGTCTGGCCTGGTTCGGTGGTCCGCCCGTCAGCAGCGGCGAGCGATGGCGATTGGCTGTGAAGCTCA
AACGGCCGGCCGGATTACTGAACCCACACGGTTTCGACTATGAAGCCTGGCTGTTGAGCCGAGGCATCGGGGCGACCGGC
ACGGTGAAGGATGGCCTTCGTCTGCAAGCGGCCCAAGGTGCGTGGCGCGACGGCGTGCGACAGGCTCTGGCCCAAGTGGA
TGCCCACGGGCGCTCCGGTGCGCTGGCGGCCTTGGTGCTTGGCGACGGCAGCGGGCTGAGCCGCGAAGATTGGCAGGTAC
TGCAAGACACTGGCACCGTCCATTTACTGGTGATTTCCGGGCAGCACATCGGGCTGCTCGCCGGTCTGGTGTACCTGCTG
GTGGCCGGTGCGGCGCGTTATGGGCTGTGGCCGGTGGGTCTGCCGTGGTTGCCTTGGGCTTGTGCGCTGGCCTTCGCCGC
AGCCCTGGGCTACGGCTTGCTCGCTGGGTTCGAGGTGCCGGTGCGGCGGGCTTGCGCGATGATCGGCCTGGTGCTCCTCT
GGCGCTTGCGCTTCAAACATCCGGACCCCTGGTGGGCATGGCTGCTGGCCTTTGTCGGGGTGCTGGTGTTCGATCCGCTG
GCCAGCCTGCGGCCGGGGTTCTGGCTGTCGTTTGCGGCGGTGGCGATATTGATGTTCACCTTTGGCGCTCGCCTGGGGCC
CTGGCGCTGGTGGCAAACCTGGACCCGTGCCCAATGGCTGGTTGCGCTCGGCCTGTGTCCGTTACTGGTGATATTGGGCT
TGCCGGTCAGCCTCAGCGGGCCGCTGGTAAATCTGCTGGCGGTGCCCTGGATCAGCCTGTTGGTGTTGCCGCCGGCGTTG
CTCGGCACGGCGTTGTTGCCGGTGCCGTTGCTCGGTGAAGGGCTGCTGTGGATAGCCGGTGGCTTACTCGATTGGCTGTT
CAAGGGGCTGGCGCTGGTTGCCGGGCGGATGCCGGCATGGGTTCCTGTTTCGATTCCGCTCTGGGCCTGGTGTATTGCCG
CCCTCGGGGCTTTTTTGCTGCTGCTGCCCAAGGGGGTGCCGCTGCGGGTGCTGGGGTGGCCAATGCTGCTGCTGATGGTT
TTTCCACCGCGAGAAAGCGTGCCGCAAGGCCATGCCGAAATCTGGCACCTGGACGTCGGCCAAGGGCTTGCGGTGCTCGT
GCGCACCCGTCGCCATAGCCTGCTTTACGATGCCGGGCCGCGCTTCGGCGAGGCCGACGCGGGCGAGCGCGTCGTGCTGC
CGACGTTGCGCAAACTGGGGGTACAGGCGTTGGATCTGATGCTGCTCAGCCATGCCGACGCCGATCACGCCGGCGGCGCT
CGCGCGGTGCGCAGCGGGCTGCCAACGAGGCGGGTGATCAGCGGCGATCCTGCCGCGCTGCCTGATGAGCTGCAAGCCGG
AGCATGCGACAGCGGCGAAGGTTGGGAGTGGGACGGGGTCAGGTTCCAATTGTGGCAATGGTCCGCTGCCCGAGAAAGCA
ACCAGAAGTCCTGCGTCTTGCTGGTCGAGGCCGGCGGCGAGCGCTTGCTGCTGACCGGCGACATCGATAGCCATGCTGAA
CAGGCCTTGCTCGACGGGCCCCTGGCGGCCCCAAGCCAGTGGCTGGCCGCCCCGCATCATGGCAGTCGCAGCTCATCGTC
GATGGCGCTGCTGGCGCGTCTGAATCCTCATTCGGTGCTGATCTCCCGGGGGCAAGGCAACGCGTTCGGTCATCCGCATC
CCCGGGTGATCGCTCGTTACCGTCGGTTGGGCCTGGCGATCTACGACAGTGCCGAACAGGGCGCCATTCGTCTGCAACTG
GGGGCCTTTGAACCCCCCTTCACCCAGGCCAGGCAGCGGCGGTATTGGCGTGATCCGCCGCCTGTCGGGCCGCAGGCCAA
ACATTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (22-165)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-672)

• Competence protein (Competence) (198-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.944	96.257	0.596