Detailed information NTG0627466

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: NDR95_RS27895
• Genome accession: NZ_CP104170
• Coordinates: 5979754..5980779 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain HW001G
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5974754..5985779

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDR95_RS27870 (NDR95_27870)	-	5974942..5975259 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
NDR95_RS27875 (NDR95_27875)	trkA	5975408..5976781 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
NDR95_RS27880 (NDR95_27880)	rsmB	5976809..5978113 (-)	1305	WP_058180433.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
NDR95_RS27885 (NDR95_27885)	fmt	5978110..5979054 (-)	945	WP_003107057.1	methionyl-tRNA formyltransferase	-
NDR95_RS27890 (NDR95_27890)	def	5979109..5979615 (-)	507	WP_003107059.1	peptide deformylase	-
NDR95_RS27895 (NDR95_27895)	tsaP	5979754..5980779 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
NDR95_RS27900 (NDR95_27900)	dprA	5980914..5982002 (+)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
NDR95_RS27905 (NDR95_27905)	-	5982043..5982600 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
NDR95_RS27910 (NDR95_27910)	-	5982610..5983587 (-)	978	WP_003111202.1	NADPH:quinone reductase	-
NDR95_RS27915 (NDR95_27915)	hemF	5983778..5984695 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
NDR95_RS27920 (NDR95_27920)	aroE	5984753..5985577 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=627466 NDR95_RS27895 WP_003097294.1 5979754..5980779(+) (tsaP) [Pseudomonas aeruginosa strain HW001G]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=627466 NDR95_RS27895 WP_003097294.1 5979754..5980779(+) (tsaP) [Pseudomonas aeruginosa strain HW001G]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393