Detailed information NTG0627385

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LOY57_RS19230
• Genome accession: NZ_CP087177
• Coordinates: 4398575..4400809 (-)
• Length: 744 a.a.
• NCBI ID: WP_258638850.1
• Uniprot ID: -
• Organism: Pseudomonas moraviensis strain B21-039
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4393575..4405809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOY57_RS19195 (LOY57_19155)	murB	4393952..4394971 (-)	1020	WP_083352204.1	UDP-N-acetylmuramate dehydrogenase	-
LOY57_RS19200 (LOY57_19160)	-	4394968..4395432 (-)	465	WP_064361450.1	low molecular weight protein-tyrosine-phosphatase	-
LOY57_RS19205 (LOY57_19165)	kdsB	4395432..4396196 (-)	765	WP_227972841.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LOY57_RS19210 (LOY57_19170)	-	4396193..4396378 (-)	186	WP_003179363.1	Trm112 family protein	-
LOY57_RS19215 (LOY57_19175)	lpxK	4396403..4397413 (-)	1011	WP_258638849.1	tetraacyldisaccharide 4'-kinase	-
LOY57_RS19220 (LOY57_19180)	-	4397413..4397841 (-)	429	WP_042610688.1	biopolymer transporter ExbD	-
LOY57_RS19225 (LOY57_19185)	exbB	4397838..4398473 (-)	636	WP_007908216.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
LOY57_RS19230 (LOY57_19190)	comA	4398575..4400809 (-)	2235	WP_258638850.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LOY57_RS19235 (LOY57_19195)	-	4400946..4401464 (+)	519	WP_042610686.1	DUF2062 domain-containing protein	-
LOY57_RS19240 (LOY57_19200)	-	4401605..4402384 (-)	780	WP_039760202.1	ABC transporter permease	-
LOY57_RS19245 (LOY57_19205)	-	4402381..4403313 (-)	933	WP_042610685.1	ABC transporter ATP-binding protein	-
LOY57_RS19250 (LOY57_19210)	-	4403447..4404070 (-)	624	WP_258638851.1	glutathione S-transferase family protein	-
LOY57_RS19255 (LOY57_19215)	-	4404114..4404773 (-)	660	WP_258638852.1	transglutaminase family protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 81815.95 Da
• Isoelectric Point: 9.4886

>NTDB_id=627385 LOY57_RS19230 WP_258638850.1 4398575..4400809(-) (comA) [Pseudomonas moraviensis strain B21-039]
MRTGMMALAVGLLAPVFLPALPPVGWWVVLPMVALMLLPFRSYPLAFLLFGFTWACVGAQMALNDRLPPPLDGETRWLEG
RVVGLPQHGDGVVRFELADARSRHEKLPSLMRLAWYAGPPVNSGERWRLAVKLKRPGGLLNPDAFDYEAWLLAQRIGATG
TIKDGQHLAEARYAWRDSVRQRLLAVNAQGREGALAALVLGDGSGLSREDWQVLQDTGTVHLLVISGQHIGLLAAVMYLL
VAGLARYGLWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVQRACVMVALVLLWRLRFRHLGAWRPLLLAFNGVLLFDPL
ASLRPGFWLSFAAVAVLIFTFGGRLGAWRWWQTWTRAQWLIAIGLCPVLLALSLPISVSGPVANLLAVPWVSLVVLPPAL
LGTLLLPVPYVGEGLLWLAGGLIDWLFIGLALIAGQWPAWIPAAIPSWALVLGSLGALLLLLPRGVPLRPLGWPLMLLLI
LPPRERIEEGRADVWQLDVGQGLAILVRTRHHALLYDAGPRFGEFDLGERVVLPALRKLNVQTLDLMMLSHADADHAGGA
GAVMRGLDVHRIVSGDPPNLPPELSAEACASGEQWQWDGVQFQLWQWSAADDSNQRSCVLQIEANGERLLLTGDIDIHAE
RVLLDSPLAVPTQWLQSPHHGSRSSSSMALLKALQPEAVLISRGHGNSFGHPHPTVLARYRKQGLRIYDSAEQGAIHLQL
GSFKPPWTMRHQRRFWREPPAPGR

Nucleotide

• Length: 2235 bp

>NTDB_id=627385 LOY57_RS19230 WP_258638850.1 4398575..4400809(-) (comA) [Pseudomonas moraviensis strain B21-039]
ATGCGCACAGGGATGATGGCGCTGGCAGTCGGTCTGCTGGCCCCGGTTTTTTTGCCGGCCTTGCCGCCGGTCGGTTGGTG
GGTGGTACTGCCGATGGTGGCGCTGATGCTCCTACCGTTTCGCAGCTATCCACTGGCATTTTTGTTGTTTGGCTTCACAT
GGGCCTGCGTCGGCGCGCAGATGGCTCTGAATGACCGCTTGCCGCCGCCACTGGACGGCGAAACCCGTTGGCTCGAGGGG
CGTGTGGTCGGCTTGCCGCAGCACGGCGACGGTGTGGTGCGTTTCGAACTGGCTGACGCCCGCTCGCGCCACGAAAAGCT
GCCATCGCTGATGCGCCTGGCGTGGTACGCCGGGCCGCCGGTCAACAGCGGCGAACGCTGGCGTCTGGCGGTGAAGTTGA
AGCGCCCGGGTGGCTTGCTCAACCCGGACGCCTTCGATTACGAGGCCTGGCTGCTCGCCCAGCGCATCGGTGCGACCGGT
ACGATCAAGGATGGCCAGCACCTGGCTGAGGCCCGTTACGCTTGGCGCGACAGCGTTCGTCAGCGCCTGCTGGCGGTCAA
TGCGCAGGGGCGAGAGGGCGCGTTGGCGGCGCTGGTGCTCGGCGACGGTTCGGGTCTGAGTCGCGAGGACTGGCAGGTAC
TGCAAGACACCGGCACCGTGCATTTGCTGGTGATTTCCGGCCAGCACATCGGTTTGCTCGCCGCGGTGATGTATCTGCTG
GTCGCCGGGCTTGCGCGATACGGTTTATGGCCGTTGCGCTGGCCATGGCTGCCCTGGGCATGCGGCCTGGCCTTCGCGGC
GGCGCTGGGTTATGGCTTGCTCGCCGGTTTCGATGTGCCGGTGCAGCGCGCCTGCGTGATGGTGGCGCTGGTGCTGTTGT
GGCGCCTGCGTTTTCGCCATCTCGGTGCGTGGAGGCCGTTGTTGCTGGCGTTCAACGGCGTGCTGCTGTTTGATCCGCTG
GCCAGTTTGCGTCCCGGTTTCTGGCTGTCTTTCGCCGCGGTGGCCGTACTGATTTTCACCTTCGGCGGGCGGCTGGGCGC
TTGGCGCTGGTGGCAGACCTGGACCCGCGCGCAGTGGCTGATCGCGATTGGCTTGTGTCCGGTGTTGCTGGCGCTCAGCT
TGCCGATCAGCGTCAGTGGCCCTGTGGCGAATCTGTTGGCGGTGCCGTGGGTCAGTCTTGTGGTATTGCCGCCGGCGTTG
CTCGGCACGCTATTGCTGCCCGTGCCTTATGTTGGCGAAGGGTTGTTGTGGCTGGCCGGTGGTTTGATCGACTGGCTGTT
TATCGGACTGGCGCTGATTGCCGGGCAATGGCCGGCGTGGATACCTGCCGCCATCCCCTCGTGGGCGCTGGTCTTGGGCA
GCCTCGGCGCCTTGTTATTGCTGTTGCCCCGTGGTGTGCCGCTGCGTCCATTGGGCTGGCCGTTGATGTTGCTGCTGATA
TTGCCGCCGCGAGAGCGAATAGAAGAGGGGCGGGCCGATGTTTGGCAACTCGACGTCGGCCAAGGCCTGGCCATCCTCGT
GCGCACCCGCCATCACGCGTTGCTTTATGACGCCGGGCCGCGTTTCGGCGAGTTCGATCTCGGCGAGCGGGTGGTGCTGC
CAGCGCTGCGCAAACTCAATGTGCAAACGCTCGACCTGATGATGCTTAGCCATGCCGACGCCGATCACGCTGGCGGCGCC
GGGGCGGTGATGCGTGGATTGGACGTGCACCGCATCGTCAGTGGCGACCCGCCAAACCTGCCGCCGGAGTTGAGCGCCGA
AGCCTGCGCAAGTGGCGAACAGTGGCAGTGGGATGGCGTGCAGTTCCAGCTCTGGCAATGGTCGGCGGCCGATGACAGCA
ACCAGCGCTCCTGTGTCTTGCAGATCGAAGCCAACGGCGAGCGCCTGCTGCTCACCGGCGACATCGACATTCACGCCGAG
CGCGTTCTGCTCGACAGTCCACTGGCGGTGCCGACGCAATGGCTGCAATCGCCGCATCACGGCAGTCGCAGCTCATCGTC
GATGGCCCTGCTCAAAGCCTTGCAGCCAGAAGCGGTGCTGATCTCCCGTGGCCACGGCAACTCCTTCGGTCACCCGCATC
CGACCGTGCTTGCGCGCTACCGCAAGCAAGGCCTGCGCATCTATGACAGCGCCGAACAGGGCGCCATCCATCTGCAACTG
GGCAGCTTCAAACCGCCGTGGACGATGCGTCACCAGCGGCGTTTCTGGCGCGAGCCGCCGGCGCCTGGCCGTTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.865	96.64	0.608
comA	Ralstonia pseudosolanacearum GMI1000	35.219	100	0.368