Detailed information NTG0626893

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: LOK79_RS16695
• Genome accession: NZ_CP087137
• Coordinates: 3377502..3378665 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JIN4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3372502..3383665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOK79_RS16665 (LOK79_16665)	-	3372767..3373186 (-)	420	WP_058906393.1	TIGR03826 family flagellar region protein	-
LOK79_RS16670 (LOK79_16670)	comFC	3373260..3373949 (-)	690	WP_196479391.1	ComF family protein	Machinery gene
LOK79_RS16675 (LOK79_16675)	-	3373955..3374239 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
LOK79_RS16680 (LOK79_16680)	comFA	3374297..3375682 (-)	1386	WP_058906395.1	DEAD/DEAH box helicase	Machinery gene
LOK79_RS16685 (LOK79_16685)	-	3375790..3376638 (-)	849	WP_058906396.1	DegV family protein	-
LOK79_RS16690 (LOK79_16690)	degU	3376736..3377425 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
LOK79_RS16695 (LOK79_16695)	degS	3377502..3378665 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
LOK79_RS16700 (LOK79_16700)	-	3378888..3379535 (+)	648	WP_003151384.1	YigZ family protein	-
LOK79_RS16705 (LOK79_16705)	-	3379540..3380754 (+)	1215	WP_003151383.1	LCP family protein	-
LOK79_RS16710 (LOK79_16710)	-	3380844..3381920 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
LOK79_RS16715 (LOK79_16715)	tuaH	3382053..3383249 (-)	1197	WP_058906397.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=626893 LOK79_RS16695 WP_003151385.1 3377502..3378665(-) (degS) [Bacillus velezensis strain JIN4]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=626893 LOK79_RS16695 WP_003151385.1 3377502..3378665(-) (degS) [Bacillus velezensis strain JIN4]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948