Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   HQN46_RS20140 Genome accession   NZ_CP087103
Coordinates   3963427..3964221 (-) Length   264 a.a.
NCBI ID   WP_000411416.1    Uniprot ID   A0A1G4L491
Organism   Bacillus toyonensis strain HA0190     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3958427..3969221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HQN46_RS20105 (HQN46_0020105) - 3958965..3960059 (+) 1095 WP_215712235.1 Rap family tetratricopeptide repeat protein -
  HQN46_RS20110 (HQN46_0020110) - 3960059..3960313 (+) 255 WP_000734398.1 hypothetical protein -
  HQN46_RS20115 (HQN46_0020115) - 3960629..3960988 (-) 360 WP_085450662.1 hypothetical protein -
  HQN46_RS20120 (HQN46_0020120) - 3961953..3962090 (+) 138 Protein_3921 recombinase family protein -
  HQN46_RS20125 (HQN46_0020125) - 3962403..3962828 (-) 426 WP_144467022.1 hypothetical protein -
  HQN46_RS20130 (HQN46_0020130) - 3962925..3963065 (-) 141 WP_176220233.1 hypothetical protein -
  HQN46_RS20135 (HQN46_0020135) - 3963055..3963261 (-) 207 WP_085450664.1 site-specific integrase -
  HQN46_RS20140 (HQN46_0020140) spo0A 3963427..3964221 (-) 795 WP_000411416.1 sporulation transcription factor Spo0A Regulator
  HQN46_RS20145 (HQN46_0020145) spoIVB 3964510..3965808 (-) 1299 WP_002048975.1 SpoIVB peptidase -
  HQN46_RS20150 (HQN46_0020150) recN 3965927..3967666 (-) 1740 WP_000947736.1 DNA repair protein RecN Machinery gene
  HQN46_RS20155 (HQN46_0020155) argR 3967928..3968377 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29427.13 Da        Isoelectric Point: 7.1176

>NTDB_id=626615 HQN46_RS20140 WP_000411416.1 3963427..3964221(-) (spo0A) [Bacillus toyonensis strain HA0190]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=626615 HQN46_RS20140 WP_000411416.1 3963427..3964221(-) (spo0A) [Bacillus toyonensis strain HA0190]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAGCCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTAACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACCTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACTAGTCATATTCGTCAAGTGAGTGGCAAGGCAAATGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACAATAGATGGAAAACCGAAAAACTTAGATGCAAGTATTACGAGTATTATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGGTACATGTACTTACGAGAAGCGATTTCTATGGTGTACAATGATATCGAATTACT
AGGGTCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCGAGCCGTGTCGAGCGTGCAATCC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGAAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G4L491

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814