Detailed information NTG0626574

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: N2A93_RS10465
• Genome accession: NZ_CP104046
• Coordinates: 2067917..2069011 (+)
• Length: 364 a.a.
• NCBI ID: WP_003105355.1
• Uniprot ID: A0ABN0INW8
• Organism: Streptococcus parauberis strain KSP14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2062917..2074011

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N2A93_RS10440 (N2A93_10440)	pgsA	2063027..2063569 (-)	543	WP_003107946.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
N2A93_RS10445 (N2A93_10445)	-	2063582..2064559 (-)	978	WP_003107947.1	RodZ family helix-turn-helix domain-containing protein	-
N2A93_RS10450 (N2A93_10450)	yfmH	2064609..2065889 (-)	1281	WP_003107948.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
N2A93_RS10455 (N2A93_10455)	yfmF	2065889..2067133 (-)	1245	WP_003105281.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
N2A93_RS10460 (N2A93_10460)	yaaA	2067510..2067914 (+)	405	WP_003103342.1	S4 domain-containing protein YaaA	-
N2A93_RS10465 (N2A93_10465)	recF	2067917..2069011 (+)	1095	WP_003105355.1	DNA replication/repair protein RecF	Machinery gene
N2A93_RS10470 (N2A93_10470)	guaB	2069199..2070680 (-)	1482	WP_003107949.1	IMP dehydrogenase	-
N2A93_RS10475 (N2A93_10475)	trpS	2070923..2071945 (-)	1023	WP_003107950.1	tryptophan--tRNA ligase	-
N2A93_RS10480 (N2A93_10480)	-	2072341..2073213 (+)	873	WP_003104058.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41839.84 Da
• Isoelectric Point: 7.6337

>NTDB_id=626574 N2A93_RS10465 WP_003105355.1 2067917..2069011(+) (recF) [Streptococcus parauberis strain KSP14]
MWLKELTLNHFRNYNDLNINFSEGLNIFIGNNAQGKTNILEAIYFIALTRSHRTRSDKELIQFSTDRLSIEGKLNRLSGN
ISLEINLSDKGRITKINSLKQAKLSEYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSDLSNYNHILKQR
NAYLKAARTIDFDFLVVLDQQLSYYGSRVIQQRIQFIADLEKEADAHHQAISNELESLQIKYISSIDTSQSQLIQEKFME
QLERNRQRDIFRKNTSIGPHRDDIEFYINNMNANFASQGQHRSLILSIKMAEVSLMKILTGDNPILLLDDVMSELDNTRQ
TKLIETVIQENVQTFITTTSLEHLSQLPKTLKTFHVTSGTIKAD

Nucleotide

• Length: 1095 bp

>NTDB_id=626574 N2A93_RS10465 WP_003105355.1 2067917..2069011(+) (recF) [Streptococcus parauberis strain KSP14]
ATGTGGTTAAAGGAATTAACACTAAATCACTTTAGAAATTATAATGACTTAAATATAAATTTTTCAGAGGGACTAAACAT
CTTTATAGGAAACAATGCCCAAGGAAAAACGAACATCTTAGAAGCTATCTATTTTATTGCCTTAACTAGAAGTCATCGCA
CAAGAAGTGATAAAGAATTAATCCAGTTTTCAACTGATCGTTTATCTATTGAAGGAAAATTAAATCGCCTCTCAGGTAAT
ATCAGTTTAGAAATTAATTTATCTGATAAAGGTCGAATAACAAAGATTAATTCATTAAAACAAGCAAAACTTTCTGAATA
TATAGGTACAATGATGGTAGTACTCTTTGCTCCTGAAGATTTACAATTAGTTAAAGGCGCTCCTAGTCTTCGAAGAAAGT
TTATTGATATTGATTTAGGTCAAATTAAACCTGTTTATCTATCTGACTTGTCGAATTATAACCATATTTTAAAACAAAGA
AACGCTTATTTAAAAGCTGCTAGAACAATTGATTTTGACTTTCTAGTAGTTTTGGATCAACAATTATCATATTATGGTAG
CCGTGTTATTCAGCAAAGAATTCAATTCATAGCTGATCTTGAAAAAGAAGCAGATGCTCATCATCAGGCAATATCAAATG
AACTAGAAAGTTTACAAATTAAATATATTTCTAGCATTGATACAAGTCAAAGTCAACTTATTCAAGAAAAATTCATGGAG
CAACTTGAAAGAAATCGTCAACGTGATATTTTTAGAAAGAATACGAGTATTGGCCCACATAGAGATGACATTGAATTTTA
TATAAATAATATGAATGCAAATTTTGCAAGCCAAGGTCAACATCGAAGCTTAATTTTATCCATAAAGATGGCTGAAGTGA
GTTTAATGAAAATCTTGACTGGAGATAATCCAATACTACTGTTAGATGATGTTATGAGTGAATTAGACAATACAAGACAA
ACAAAATTAATTGAGACTGTCATTCAAGAAAATGTTCAAACTTTTATTACTACTACTAGTTTGGAACACCTCTCGCAACT
TCCAAAAACTTTAAAAACTTTTCATGTAACTAGTGGAACCATTAAGGCAGACTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	61.281	98.626	0.604
recF	Bacillus subtilis subsp. subtilis str. 168	43.935	100	0.448