Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BAPNAU_RS06705 | Genome accession | NC_022530 |
| Coordinates | 1341341..1342411 (+) | Length | 356 a.a. |
| NCBI ID | WP_014418378.1 | Uniprot ID | A0AAP4DGV9 |
| Organism | Bacillus velezensis NAU-B3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1336341..1347411
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAPNAU_RS06675 (BAPNAU_1272) | - | 1336814..1337059 (-) | 246 | WP_003153078.1 | DUF2626 domain-containing protein | - |
| BAPNAU_RS06680 (BAPNAU_1273) | - | 1337296..1337676 (+) | 381 | WP_003153079.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| BAPNAU_RS06690 (BAPNAU_1274) | - | 1337883..1338713 (+) | 831 | WP_022552960.1 | STAS domain-containing protein | - |
| BAPNAU_RS06695 (BAPNAU_1275) | - | 1338751..1340052 (-) | 1302 | WP_022552961.1 | hemolysin family protein | - |
| BAPNAU_RS06700 (BAPNAU_1276) | - | 1340198..1341148 (+) | 951 | WP_014418379.1 | magnesium transporter CorA family protein | - |
| BAPNAU_RS06705 (BAPNAU_1277) | comGA | 1341341..1342411 (+) | 1071 | WP_014418378.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BAPNAU_RS06710 (BAPNAU_1278) | comGB | 1342398..1343435 (+) | 1038 | WP_022552962.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BAPNAU_RS06715 (BAPNAU_1279) | comGC | 1343482..1343748 (+) | 267 | WP_050496152.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BAPNAU_RS06720 (BAPNAU_1280) | comGD | 1343738..1344175 (+) | 438 | WP_007612572.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BAPNAU_RS06725 (BAPNAU_1281) | comGE | 1344159..1344473 (+) | 315 | WP_021494312.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| BAPNAU_RS06730 (BAPNAU_1282) | comGF | 1344487..1344882 (+) | 396 | WP_046559876.1 | competence type IV pilus minor pilin ComGF | - |
| BAPNAU_RS06735 (BAPNAU_1283) | comGG | 1344883..1345260 (+) | 378 | WP_022552965.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| BAPNAU_RS06740 (BAPNAU_1284) | - | 1345317..1345496 (+) | 180 | WP_022552966.1 | YqzE family protein | - |
| BAPNAU_RS06745 (BAPNAU_1285) | - | 1345537..1345866 (-) | 330 | WP_012117979.1 | DUF3889 domain-containing protein | - |
| BAPNAU_RS06750 (BAPNAU_1286) | tapA | 1346125..1346796 (+) | 672 | WP_014418371.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BAPNAU_RS06755 (BAPNAU_1287) | - | 1346768..1347352 (+) | 585 | WP_022552967.1 | signal peptidase I | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40529.81 Da Isoelectric Point: 9.3485
>NTDB_id=62650 BAPNAU_RS06705 WP_014418378.1 1341341..1342411(+) (comGA) [Bacillus velezensis NAU-B3]
MKNIETYSRNIINEAYTARASDIHIVPRERDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKQQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD
MKNIETYSRNIINEAYTARASDIHIVPRERDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKQQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD
Nucleotide
Download Length: 1071 bp
>NTDB_id=62650 BAPNAU_RS06705 WP_014418378.1 1341341..1342411(+) (comGA) [Bacillus velezensis NAU-B3]
GTGAAAAATATTGAAACATACAGCAGGAACATCATAAACGAGGCCTATACGGCAAGGGCTTCAGATATACACATTGTGCC
GAGAGAAAGGGATGCTTTCATTCATTTTCGCATCGGCCATGCTCTTGTGAAAAAAAGAGTCTTAAAAAAAGAGGAATGTG
TAAGGCTTATTTCTCATTTCAAGTTTTTATCGGCCATGGATATAGGAGAAAGACGAAAGCCGCAAAACGGGTCATTGTCT
CTGCCGCTTCCGACAGAAACCGTTCATTTGAGAATGTCAACCTTGCCGACAATGAATGATGAAAGTCTTGTCATCAGGCT
TTTGCCTAAGCAGCAGATTCCCCCTCTGGATAAACTGTCCTTATTTCGGGGGGCAGGCGCCGCACTATTGTCCTTTCTGA
AGCATTCGCACGGCCTGCTTCTGTTTACCGGCCCGACCGGATCTGGAAAAACGACCACTCTTTACTCGCTTGTCAACTAT
GCAAAACGGCATTTCAACCGGCGGATTGTCACGCTTGAAGACCCCGTAGAAACAAGAGATGAGGATGTGCTGCAAGTTCA
GGTGAATGAAAAAGCCGGAGTCACATATTCCGCCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATGATCATCTTAG
GGGAAATCAGGGATGCCGAGACGGCTGAAATCGCAGTCCGCGCGGCAATGACGGGACACCTCGTTCTTTCAAGCCTGCAT
ACAAGAGATGCTAAGGGCGCCATATACAGGCTGCTGGAGTTTGGCGTGAACATGACAGAAATTGAACAAACCGTCATTGC
CATTGCCGCTCAGCGTCTGGTTGATTTAACATGTCCGTTCTGCAAAGAGGAAAACTGTTCCGTGTACTGCCGGATGTACA
GGCAGACACGCCGTGCGGGCATTTATGAACTGCTCTACGGGAAAAACCTCACCCAATGCTTTCAGGAAGCAAAGGGAGAG
CACGCCAATTTTCAATATCAGACGCTCCGCAGGCTGATCAGAAAAGGAATCGCGCTCGGCTATGTCACGACCGACAATTA
CGATCGGTGGGTGTATCATGAAGCGGATTAA
GTGAAAAATATTGAAACATACAGCAGGAACATCATAAACGAGGCCTATACGGCAAGGGCTTCAGATATACACATTGTGCC
GAGAGAAAGGGATGCTTTCATTCATTTTCGCATCGGCCATGCTCTTGTGAAAAAAAGAGTCTTAAAAAAAGAGGAATGTG
TAAGGCTTATTTCTCATTTCAAGTTTTTATCGGCCATGGATATAGGAGAAAGACGAAAGCCGCAAAACGGGTCATTGTCT
CTGCCGCTTCCGACAGAAACCGTTCATTTGAGAATGTCAACCTTGCCGACAATGAATGATGAAAGTCTTGTCATCAGGCT
TTTGCCTAAGCAGCAGATTCCCCCTCTGGATAAACTGTCCTTATTTCGGGGGGCAGGCGCCGCACTATTGTCCTTTCTGA
AGCATTCGCACGGCCTGCTTCTGTTTACCGGCCCGACCGGATCTGGAAAAACGACCACTCTTTACTCGCTTGTCAACTAT
GCAAAACGGCATTTCAACCGGCGGATTGTCACGCTTGAAGACCCCGTAGAAACAAGAGATGAGGATGTGCTGCAAGTTCA
GGTGAATGAAAAAGCCGGAGTCACATATTCCGCCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATGATCATCTTAG
GGGAAATCAGGGATGCCGAGACGGCTGAAATCGCAGTCCGCGCGGCAATGACGGGACACCTCGTTCTTTCAAGCCTGCAT
ACAAGAGATGCTAAGGGCGCCATATACAGGCTGCTGGAGTTTGGCGTGAACATGACAGAAATTGAACAAACCGTCATTGC
CATTGCCGCTCAGCGTCTGGTTGATTTAACATGTCCGTTCTGCAAAGAGGAAAACTGTTCCGTGTACTGCCGGATGTACA
GGCAGACACGCCGTGCGGGCATTTATGAACTGCTCTACGGGAAAAACCTCACCCAATGCTTTCAGGAAGCAAAGGGAGAG
CACGCCAATTTTCAATATCAGACGCTCCGCAGGCTGATCAGAAAAGGAATCGCGCTCGGCTATGTCACGACCGACAATTA
CGATCGGTGGGTGTATCATGAAGCGGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
82.303 |
100 |
0.823 |
| pilB | Glaesserella parasuis strain SC1401 |
38.793 |
97.753 |
0.379 |
| pilF | Thermus thermophilus HB27 |
37.892 |
98.596 |
0.374 |