Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LOD77_RS01110 Genome accession   NZ_CP086728
Coordinates   208970..210229 (+) Length   419 a.a.
NCBI ID   WP_239604470.1    Uniprot ID   -
Organism   Streptococcus parasuis strain SS20     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 203970..215229
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOD77_RS01090 (LOD77_01075) - 205550..206842 (+) 1293 WP_274505547.1 adenylosuccinate synthase -
  LOD77_RS01095 (LOD77_01080) yajC 206952..207275 (+) 324 WP_024396366.1 preprotein translocase subunit YajC -
  LOD77_RS01100 (LOD77_01085) - 207389..208144 (+) 756 WP_174846571.1 isoprenyl transferase -
  LOD77_RS01105 (LOD77_01090) - 208154..208960 (+) 807 WP_274505548.1 phosphatidate cytidylyltransferase -
  LOD77_RS01110 (LOD77_01095) eeP 208970..210229 (+) 1260 WP_239604470.1 RIP metalloprotease RseP Regulator
  LOD77_RS01115 (LOD77_01100) - 210504..212366 (+) 1863 WP_274505549.1 proline--tRNA ligase -
  LOD77_RS01125 (LOD77_01110) - 213816..213992 (+) 177 WP_274505551.1 putative holin-like toxin -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 44781.30 Da        Isoelectric Point: 5.4497

>NTDB_id=626182 LOD77_RS01110 WP_239604470.1 208970..210229(+) (eeP) [Streptococcus parasuis strain SS20]
MRGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GTPASLSLNEAGVVTRINLTGKQLDNLSLPMNVTSFDFEKKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLITNFAGPMNNFILGILVFIFLMFMQGGVADLSSNAVSITDGGALQAAGLVTGDKILSVNGDATDSYTEVAT
IISKAAADATTAPSFGLVVEHDGATKNVTVTAEKVDGTYRIGISPILKTGFVDKIVGGFQEAGATALLIVTALKNLIANF
DVKQLGGPVAIYKVSAQAAEFGLASVLGLMAMLSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=626182 LOD77_RS01110 WP_239604470.1 208970..210229(+) (eeP) [Streptococcus parasuis strain SS20]
ATGAGAGGAATTTTAGCATTTATTTTTATTTTTGGTGTCATTGTGGTTGTCCATGAATTTGGTCACTTCTACTTTGCTAA
GAAAGCAGGAATCCTTGTAAGGGAATTTGCGATTGGGATGGGGCCAAAGATTTTCGCTCATACAGGTAAGGATGGGACGC
TTTACACGATTCGTATTCTTCCTCTTGGTGGTTATGTTCGAATGGCCGGTTGGGGTGAAGATAAGACAGAGATTAAGACA
GGGACTCCTGCTAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATAAATTTAACTGGAAAACAGCTAGATAACCT
TAGCTTACCGATGAATGTGACTAGTTTTGATTTCGAAAAAAAATTAGAAATTACAGGCTTGGTCTTGGAAGAAAGCAAGA
CTTATAAAGTTGATCACGATGCAACGATTGTCGAGGAAGATGGCACTGAAGTTCGAATTGCTCCACTGGATGTTCAATAC
CAAAATGCGACAGTCTGGGGGCGCTTGATCACCAACTTTGCTGGGCCGATGAATAACTTCATTTTAGGCATCTTAGTTTT
TATTTTTTTGATGTTCATGCAAGGTGGGGTCGCCGATTTGTCAAGCAATGCAGTTAGTATTACTGATGGTGGTGCCTTAC
AAGCAGCTGGACTTGTGACTGGTGATAAAATTTTATCTGTCAATGGTGATGCAACAGACAGCTACACAGAAGTCGCGACG
ATCATTAGCAAGGCGGCGGCAGATGCAACAACTGCTCCAAGCTTTGGTTTGGTTGTGGAACATGATGGAGCAACCAAAAA
TGTGACCGTTACTGCGGAGAAAGTGGACGGAACCTATCGAATTGGGATTTCACCAATCTTGAAGACGGGCTTCGTTGATA
AAATAGTCGGTGGTTTCCAAGAAGCAGGTGCGACGGCACTCTTGATTGTAACAGCTTTGAAAAATCTTATTGCAAACTTT
GATGTGAAACAATTGGGTGGTCCTGTAGCCATCTATAAAGTTAGTGCCCAAGCTGCTGAATTTGGTTTGGCATCTGTATT
GGGGCTAATGGCCATGCTTTCCATTAACCTTGGAATATTTAATTTGATTCCAATTCCAGCCTTAGATGGTGGTAAAATTG
TGATGAATATTCTGGAAGCAATACGTAGAAAACCATTAAAGCCAGAAACAGAATCTTATATTACCCTAGCGGGTGTGGCC
GTAATGGTAGTTCTTATGATAGTAGTCACATGGAATGACATTATACGTGTTTTCTTCTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-405)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.952

100

0.661
  eeP Streptococcus thermophilus LMD-9

65.714

100

0.659