Detailed information NTG0626024

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: LN243_RS07155
• Genome accession: NZ_CP086659
• Coordinates: 1430521..1431495 (+)
• Length: 324 a.a.
• NCBI ID: WP_023350200.1
• Uniprot ID: -
• Organism: Staphylococcus capitis strain XZ03
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1425521..1436495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LN243_RS07120	rpmG	1426034..1426183 (+)	150	WP_002433802.1	50S ribosomal protein L33	-
LN243_RS07125	-	1426332..1426883 (+)	552	WP_030063896.1	5-formyltetrahydrofolate cyclo-ligase	-
LN243_RS07130	-	1426884..1428347 (+)	1464	WP_023350197.1	rhomboid family intramembrane serine protease	-
LN243_RS07135	-	1428328..1428531 (+)	204	WP_002433937.1	YqgQ family protein	-
LN243_RS07140	-	1428528..1429514 (+)	987	WP_023350198.1	ROK family glucokinase	-
LN243_RS07145	-	1429514..1429840 (+)	327	WP_002433945.1	MTH1187 family thiamine-binding protein	-
LN243_RS07150	-	1429840..1430463 (+)	624	WP_023350199.1	MBL fold metallo-hydrolase	-
LN243_RS07155	comGA	1430521..1431495 (+)	975	WP_023350200.1	competence type IV pilus ATPase ComGA	Machinery gene
LN243_RS07160	comGB	1431467..1432534 (+)	1068	WP_023350201.1	competence type IV pilus assembly protein ComGB	-
LN243_RS07165	comGC	1432553..1432864 (+)	312	WP_030063893.1	competence type IV pilus major pilin ComGC	Machinery gene
LN243_RS07170	comGD	1432842..1433291 (+)	450	WP_023350202.1	competence type IV pilus minor pilin ComGD	-
LN243_RS07175	-	1433278..1433577 (+)	300	WP_023350203.1	hypothetical protein	-
LN243_RS07180	comGF	1433495..1433986 (+)	492	WP_037560565.1	competence type IV pilus minor pilin ComGF	-
LN243_RS07190	-	1434156..1434665 (+)	510	WP_029625706.1	shikimate kinase	-
LN243_RS07195	gcvT	1434874..1435965 (+)	1092	WP_023350205.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37044.84 Da
• Isoelectric Point: 7.7305

>NTDB_id=626024 LN243_RS07155 WP_023350200.1 1430521..1431495(+) (comGA) [Staphylococcus capitis strain XZ03]
MKILFQEIVNYAIKHAASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAHQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT

Nucleotide

• Length: 975 bp

>NTDB_id=626024 LN243_RS07155 WP_023350200.1 1430521..1431495(+) (comGA) [Staphylococcus capitis strain XZ03]
ATGAAAATATTATTCCAAGAGATAGTTAATTATGCTATAAAGCACGCTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGTGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACACTGCCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCCATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAGGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTAACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTATCTAAGGAAGGGGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.898	99.691	0.707
comGA	Staphylococcus aureus N315	70.898	99.691	0.707