Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   LN243_RS01250 Genome accession   NZ_CP086659
Coordinates   287521..288417 (+) Length   298 a.a.
NCBI ID   WP_030059207.1    Uniprot ID   -
Organism   Staphylococcus capitis strain XZ03     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 282521..293417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LN243_RS01225 - 282836..282937 (+) 102 WP_016898541.1 SE2200 family small protein -
  LN243_RS01230 - 283121..284662 (+) 1542 Protein_244 NAD(P)H-binding protein -
  LN243_RS01235 - 284856..286340 (-) 1485 WP_030059210.1 alkaline phosphatase -
  LN243_RS01240 - 286667..286819 (+) 153 WP_002436229.1 hypothetical protein -
  LN243_RS01245 braR 286850..287515 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  LN243_RS01250 braS 287521..288417 (+) 897 WP_030059207.1 sensor histidine kinase Regulator
  LN243_RS01255 - 288527..289276 (+) 750 WP_030059205.1 ABC transporter ATP-binding protein -
  LN243_RS01260 - 289302..291293 (+) 1992 WP_230580066.1 FtsX-like permease family protein -
  LN243_RS01265 - 291520..292392 (+) 873 WP_030059201.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34543.82 Da        Isoelectric Point: 5.6334

>NTDB_id=626008 LN243_RS01250 WP_030059207.1 287521..288417(+) (braS) [Staphylococcus capitis strain XZ03]
MFLSFIKSIRNEITIIFCIFLLFALIFYLFSLPFSAFGLALGIVLLIIVIHWWVKYLGFKRNEDLKEKVDNLENELTEVK
NRQVEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVQIDNYTSLALSYLKLLNEESDMTISSVTVNEL
IRPLIMKYRIQFIEQHTKIHYEKCEATVLTDAQWASIMIEQILNNALKYARGKDIWIEFDSAKQTLIIKDNGVGISKADI
PKIFDKGYSGYNGRLNEESSGIGLFIVKHISNHLNHEVDVDSGLGEGTTFKIHFPNED

Nucleotide


Download         Length: 897 bp        

>NTDB_id=626008 LN243_RS01250 WP_030059207.1 287521..288417(+) (braS) [Staphylococcus capitis strain XZ03]
ATGTTCCTATCTTTTATAAAATCGATTCGAAATGAGATTACAATTATATTTTGTATATTTTTATTATTTGCATTAATATT
TTACTTATTTTCATTACCATTTAGTGCCTTCGGTCTTGCGTTAGGAATCGTATTACTCATCATTGTTATTCATTGGTGGG
TAAAGTACCTTGGATTTAAGAGAAATGAGGATCTTAAAGAGAAGGTAGATAATTTGGAAAATGAATTAACTGAAGTAAAA
AATCGCCAAGTAGAATATCGTAATGATGTGGAAAGTTACTTTTTAACATGGGTACACCAAATTAAGACACCTATCACAGC
GTCACAACTATTACTCGAACGTAATGAAGAAAATGTTGTCAATCGCGTAAGACAAGAAATTGTTCAAATTGATAACTATA
CAAGCTTAGCATTGAGTTATTTAAAATTACTCAACGAAGAATCTGATATGACAATTTCATCAGTGACAGTGAATGAACTA
ATACGTCCGTTAATCATGAAATATCGAATTCAATTTATCGAACAACATACTAAAATACACTATGAAAAGTGTGAAGCAAC
TGTTTTAACGGATGCACAATGGGCGTCTATTATGATAGAACAAATTTTAAATAATGCTTTGAAGTACGCGCGTGGAAAAG
ACATTTGGATTGAATTTGATTCTGCTAAACAAACATTAATCATTAAAGACAATGGTGTAGGTATTAGTAAAGCAGATATT
CCTAAAATATTTGATAAAGGCTATTCTGGTTACAACGGCAGACTTAATGAAGAATCAAGCGGCATAGGATTGTTCATTGT
TAAGCATATTTCTAATCATTTGAATCATGAGGTCGATGTAGATTCAGGACTTGGTGAAGGTACGACATTTAAAATACATT
TTCCCAACGAAGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

64.407

98.993

0.638