Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   LN051_RS00555 Genome accession   NZ_CP086654
Coordinates   126367..127218 (+) Length   283 a.a.
NCBI ID   WP_229293578.1    Uniprot ID   -
Organism   Staphylococcus ratti strain CCM 9025     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 121367..132218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LN051_RS00525 (LN051_00525) - 122053..122385 (+) 333 WP_229292694.1 hypothetical protein -
  LN051_RS00530 (LN051_00530) - 122445..122972 (+) 528 WP_229292695.1 hypothetical protein -
  LN051_RS00535 (LN051_00535) - 123347..124114 (-) 768 WP_229292696.1 hypothetical protein -
  LN051_RS00540 (LN051_00540) - 124458..124730 (-) 273 WP_229292697.1 hypothetical protein -
  LN051_RS00545 (LN051_00545) - 125064..125501 (-) 438 WP_338061514.1 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein -
  LN051_RS00550 (LN051_00550) braR 125633..126298 (+) 666 WP_229292698.1 response regulator transcription factor Regulator
  LN051_RS00555 (LN051_00555) braS 126367..127218 (+) 852 WP_229293578.1 sensor histidine kinase Regulator
  LN051_RS00560 (LN051_00560) - 127309..128058 (+) 750 WP_229292699.1 ABC transporter ATP-binding protein -
  LN051_RS00565 (LN051_00565) - 128060..128254 (+) 195 WP_229292700.1 hypothetical protein -
  LN051_RS00570 (LN051_00570) - 128254..130053 (+) 1800 WP_229292701.1 ABC transporter permease -
  LN051_RS00575 (LN051_00575) isaB 130336..130836 (+) 501 WP_229292702.1 immunodominant staphylococcal antigen IsaB family protein -
  LN051_RS00580 (LN051_00580) spn 130997..131317 (-) 321 WP_229292703.1 SPIN family peroxidase inhibitor -

Sequence

Protein


Download         Length: 283 a.a.        Molecular weight: 32601.75 Da        Isoelectric Point: 8.9023

>NTDB_id=625947 LN051_RS00555 WP_229293578.1 126367..127218(+) (braS) [Staphylococcus ratti strain CCM 9025]
MLFLITFYVYALSMEAYLLTLAIGIFVFGVVLALKYLSFHKEETVKQANEQLKDMLHEEKMAHRMYQKDIENYFLTWIHQ
IKTPITASKLLLERHEAGTVNRVRQEITEIENYTNLALNYLKLLNHETDMVAKSVTLEAVVKPLIKRYALHFIENQTRIH
TDNLHQKVTTDAQWLRIMIEQILNNALKYTKSGDIWIAYDSDQKALSIRDNGIGISKADLPKIFEKGYSGTNGRLNEKSS
GIGLFVVKQISKKLQHPIEVNSEQGVSTTFTIYFPVDSNLSKM

Nucleotide


Download         Length: 852 bp        

>NTDB_id=625947 LN051_RS00555 WP_229293578.1 126367..127218(+) (braS) [Staphylococcus ratti strain CCM 9025]
ATGTTATTCTTGATTACATTTTATGTATATGCGCTATCGATGGAAGCTTATTTATTAACATTAGCAATCGGTATATTTGT
ATTTGGCGTTGTTTTAGCACTTAAGTATCTCTCATTTCATAAAGAAGAAACTGTAAAGCAGGCGAATGAACAGTTAAAAG
ATATGTTACATGAGGAAAAAATGGCGCATCGTATGTATCAAAAAGATATTGAAAATTATTTCTTAACATGGATACATCAA
ATTAAAACGCCGATCACTGCTTCAAAATTGTTGTTAGAGCGTCACGAAGCAGGGACAGTAAATCGTGTCCGTCAAGAAAT
AACTGAAATTGAAAATTATACCAATTTAGCATTGAATTACTTAAAATTGTTGAATCATGAAACGGACATGGTCGCTAAAA
GTGTCACGCTTGAAGCGGTTGTTAAACCTTTAATTAAACGTTATGCCTTACATTTTATTGAAAATCAAACGCGAATACAT
ACAGACAATCTTCATCAAAAAGTAACTACGGATGCGCAATGGTTACGCATTATGATTGAACAAATATTAAATAATGCGTT
GAAATATACGAAAAGTGGTGACATTTGGATAGCATATGATAGCGATCAAAAAGCACTTTCCATTCGTGATAACGGGATAG
GTATTAGTAAAGCAGACTTACCTAAAATATTCGAAAAGGGGTATTCTGGTACTAACGGACGATTGAATGAAAAATCAAGT
GGGATAGGTTTGTTTGTCGTGAAGCAAATTTCAAAAAAGCTACAACATCCGATAGAAGTGAATTCAGAGCAAGGGGTTTC
AACGACATTTACGATTTACTTCCCTGTTGATTCAAACCTTTCAAAAATGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(171-277)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

51.095

96.82

0.495