Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   LK342_RS12755 Genome accession   NZ_CP086574
Coordinates   2649059..2649946 (-) Length   295 a.a.
NCBI ID   WP_047527585.1    Uniprot ID   -
Organism   Staphylococcus argenteus strain RIVM_M046968     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2644059..2654946
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK342_RS12740 (LK342_12740) - 2644268..2644765 (-) 498 WP_001065264.1 glutathione peroxidase -
  LK342_RS13440 - 2644775..2645026 (-) 252 WP_047436046.1 hypothetical protein -
  LK342_RS12745 (LK342_12745) - 2646194..2648200 (-) 2007 WP_047527580.1 ABC transporter permease -
  LK342_RS12750 (LK342_12750) - 2648197..2648952 (-) 756 WP_047527582.1 ABC transporter ATP-binding protein -
  LK342_RS12755 (LK342_12755) braS 2649059..2649946 (-) 888 WP_047527585.1 sensor histidine kinase Regulator
  LK342_RS12760 (LK342_12760) braR 2649957..2650622 (-) 666 WP_000697875.1 response regulator transcription factor Regulator
  LK342_RS12765 (LK342_12765) - 2650658..2650843 (-) 186 WP_000604733.1 hypothetical protein -
  LK342_RS12770 (LK342_12770) - 2651033..2651260 (-) 228 WP_072368946.1 hypothetical protein -
  LK342_RS12775 (LK342_12775) - 2651262..2651627 (+) 366 Protein_2480 transposase -
  LK342_RS12780 (LK342_12780) - 2651643..2652197 (-) 555 WP_047527590.1 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein -
  LK342_RS12785 (LK342_12785) - 2652376..2653290 (+) 915 WP_047527592.1 alpha/beta hydrolase -
  LK342_RS12790 (LK342_12790) - 2653311..2653949 (+) 639 WP_031788279.1 SDR family oxidoreductase -
  LK342_RS12795 (LK342_12795) - 2654020..2654730 (+) 711 WP_047436057.1 dihydrofolate reductase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34067.55 Da        Isoelectric Point: 6.7553

>NTDB_id=625603 LK342_RS12755 WP_047527585.1 2649059..2649946(-) (braS) [Staphylococcus argenteus strain RIVM_M046968]
MTFIKKIAQEISIVFVIVALFGLMFYLYRLPLEAFLLTLAIVSLLLLIYIGIMYLSFVKTISQQQQIENLETALYQLKND
QLEYKNDIESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEIIQIDNYTSLALSYLKLLNETSDISVAQISINDLIR
PIIMKYSIQFIDQKTKIHYEPCHCMVLTDVRWTSLMIEQLINNALKYARGKDIWIEYDEKSKQLHIKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSTGIGLFIVKQVSNHTNHPVSVVSKQNQGTTFTIQFPNE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=625603 LK342_RS12755 WP_047527585.1 2649059..2649946(-) (braS) [Staphylococcus argenteus strain RIVM_M046968]
ATGACGTTTATTAAAAAAATTGCTCAGGAAATAAGTATAGTTTTTGTTATTGTAGCTTTGTTTGGCTTGATGTTTTATCT
ATATCGATTACCACTAGAAGCTTTTTTATTGACGCTTGCAATCGTTTCATTGTTATTACTTATTTACATAGGAATTATGT
ACTTAAGCTTTGTTAAGACTATAAGTCAACAGCAACAAATTGAAAACTTAGAAACAGCATTGTATCAACTTAAAAATGAT
CAGCTTGAATATAAAAATGATATAGAAAGTTATTTTTTGACATGGGTGCACCAAATGAAAACGCCAATTACTGCGGCACA
ACTATTACTTGAAAGAGATGAACCAAATGTTGTGAATCGTGTTCGCCAAGAAATTATTCAAATTGATAACTATACAAGTT
TAGCATTAAGTTATTTAAAATTATTAAATGAAACATCTGATATATCAGTCGCTCAAATATCAATTAACGATTTAATTAGA
CCAATTATTATGAAATATTCGATACAGTTTATTGATCAAAAAACAAAAATACATTATGAACCTTGTCATTGTATGGTATT
AACCGATGTACGATGGACTTCTTTAATGATAGAACAGCTAATTAATAATGCATTAAAATATGCTAGAGGTAAAGATATAT
GGATTGAATATGATGAGAAATCAAAACAATTACATATTAAAGACAATGGTATTGGCATTAGTGAAGCGGACTTGCCAAAA
ATATTTGATAAAGGCTATTCAGGATATAATGGACAACGCCAAAGTAATTCAACGGGCATCGGCTTATTTATTGTAAAGCA
AGTTTCCAATCATACGAATCATCCTGTTTCAGTCGTATCTAAACAGAATCAAGGTACAACATTTACGATTCAATTTCCAA
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

88.475

100

0.885