Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   LK336_RS10330 Genome accession   NZ_CP086572
Coordinates   2160078..2160965 (+) Length   295 a.a.
NCBI ID   WP_031788274.1    Uniprot ID   -
Organism   Staphylococcus argenteus strain RIVM_M036020     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2155078..2165965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK336_RS10290 (LK336_10280) - 2155294..2156004 (-) 711 WP_000193375.1 dihydrofolate reductase family protein -
  LK336_RS10295 (LK336_10285) - 2156075..2156713 (-) 639 WP_031788279.1 SDR family oxidoreductase -
  LK336_RS10300 (LK336_10290) - 2156734..2157648 (-) 915 WP_031788278.1 alpha/beta hydrolase -
  LK336_RS10305 (LK336_10295) - 2157827..2158381 (+) 555 WP_031788277.1 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein -
  LK336_RS10310 (LK336_10300) - 2158413..2158777 (-) 365 Protein_1995 transposase -
  LK336_RS10315 (LK336_10305) - 2158767..2158991 (+) 225 Protein_1996 ATP-binding protein -
  LK336_RS10320 (LK336_10310) - 2159181..2159366 (+) 186 WP_000604733.1 hypothetical protein -
  LK336_RS10325 (LK336_10315) braR 2159402..2160067 (+) 666 WP_000697875.1 response regulator transcription factor Regulator
  LK336_RS10330 (LK336_10320) braS 2160078..2160965 (+) 888 WP_031788274.1 sensor histidine kinase Regulator
  LK336_RS10335 (LK336_10325) - 2161072..2161827 (+) 756 WP_031788273.1 ABC transporter ATP-binding protein -
  LK336_RS10340 (LK336_10330) - 2161824..2163830 (+) 2007 WP_031788272.1 ABC transporter permease -
  LK336_RS10345 (LK336_10335) - 2165260..2165757 (+) 498 WP_001065264.1 glutathione peroxidase -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34059.56 Da        Isoelectric Point: 6.6448

>NTDB_id=625556 LK336_RS10330 WP_031788274.1 2160078..2160965(+) (braS) [Staphylococcus argenteus strain RIVM_M036020]
MTFIKKIAQEISIVVVIVALFGLMFYLYRLPLEAFLLTLAIVSLLLLIYIGIMYLSFVKTISQQQQIENLETALYQLKND
QLEYKNDIESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEIIQIDNYTSLALSYLKLLNETSDISVAQISINDLIR
PIIMKYSIQFIDQKTKIHYEPCHCMVLTDVRWTSLMIEQLINNALKYARGKDIWIEYDEKSKQLYIKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSTGIGLFIVKQVSNHTNHPVSVISKQNQGTTFTIQFPNE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=625556 LK336_RS10330 WP_031788274.1 2160078..2160965(+) (braS) [Staphylococcus argenteus strain RIVM_M036020]
ATGACGTTTATTAAAAAAATTGCTCAGGAAATAAGTATAGTTGTTGTTATTGTAGCTTTGTTTGGCTTGATGTTTTATCT
ATATCGATTGCCACTAGAAGCTTTTTTATTGACGCTTGCAATCGTTTCATTGTTATTACTTATTTACATAGGAATTATGT
ACTTAAGCTTTGTTAAGACTATAAGTCAACAGCAACAAATTGAAAACTTAGAAACAGCATTGTATCAACTTAAAAATGAT
CAGCTTGAATATAAAAATGATATAGAAAGTTATTTTTTGACATGGGTACACCAAATGAAAACGCCAATTACTGCGGCACA
ACTATTACTTGAAAGAGATGAACCAAATGTTGTGAATCGTGTTCGCCAAGAAATTATTCAAATTGATAACTATACAAGTT
TAGCGTTAAGTTATTTAAAATTATTAAATGAAACATCTGATATATCAGTCGCTCAAATATCAATTAACGATTTAATTAGA
CCAATTATTATGAAATACTCGATACAGTTTATTGATCAAAAAACAAAAATACATTATGAACCTTGTCATTGTATGGTATT
AACCGATGTACGATGGACTTCTTTAATGATAGAACAGCTAATTAATAATGCATTAAAATATGCTAGAGGTAAAGATATAT
GGATTGAATATGATGAGAAATCAAAACAATTATATATTAAAGACAATGGTATTGGCATTAGTGAAGCGGACTTGCCAAAA
ATATTTGATAAAGGCTATTCAGGATATAATGGACAACGCCAAAGTAATTCAACGGGCATCGGTTTATTTATTGTGAAGCA
AGTTTCCAATCATACGAATCATCCTGTTTCAGTCATATCTAAACAGAATCAAGGTACAACATTTACGATTCAATTTCCAA
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

87.797

100

0.878