Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LK336_RS10325 Genome accession   NZ_CP086572
Coordinates   2159402..2160067 (+) Length   221 a.a.
NCBI ID   WP_000697875.1    Uniprot ID   -
Organism   Staphylococcus argenteus strain RIVM_M036020     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2154402..2165067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK336_RS10285 (LK336_10275) - 2154527..2155279 (-) 753 WP_031788280.1 SDR family NAD(P)-dependent oxidoreductase -
  LK336_RS10290 (LK336_10280) - 2155294..2156004 (-) 711 WP_000193375.1 dihydrofolate reductase family protein -
  LK336_RS10295 (LK336_10285) - 2156075..2156713 (-) 639 WP_031788279.1 SDR family oxidoreductase -
  LK336_RS10300 (LK336_10290) - 2156734..2157648 (-) 915 WP_031788278.1 alpha/beta hydrolase -
  LK336_RS10305 (LK336_10295) - 2157827..2158381 (+) 555 WP_031788277.1 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein -
  LK336_RS10310 (LK336_10300) - 2158413..2158777 (-) 365 Protein_1995 transposase -
  LK336_RS10315 (LK336_10305) - 2158767..2158991 (+) 225 Protein_1996 ATP-binding protein -
  LK336_RS10320 (LK336_10310) - 2159181..2159366 (+) 186 WP_000604733.1 hypothetical protein -
  LK336_RS10325 (LK336_10315) braR 2159402..2160067 (+) 666 WP_000697875.1 response regulator transcription factor Regulator
  LK336_RS10330 (LK336_10320) braS 2160078..2160965 (+) 888 WP_031788274.1 sensor histidine kinase Regulator
  LK336_RS10335 (LK336_10325) - 2161072..2161827 (+) 756 WP_031788273.1 ABC transporter ATP-binding protein -
  LK336_RS10340 (LK336_10330) - 2161824..2163830 (+) 2007 WP_031788272.1 ABC transporter permease -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25270.26 Da        Isoelectric Point: 4.7961

>NTDB_id=625555 LK336_RS10325 WP_000697875.1 2159402..2160067(+) (braR) [Staphylococcus argenteus strain RIVM_M036020]
MKILIVEDDFVIAESLASELKKWNYDVVVAEQFDNITAVFNNHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIMFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVVNDTLTVKGCTLILDEAKVAYQGESIQLSLTELQILK
LLFQSEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLSTIGLNDFITTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=625555 LK336_RS10325 WP_000697875.1 2159402..2160067(+) (braR) [Staphylococcus argenteus strain RIVM_M036020]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCGGAAAGTTTAGCATCTGAATTAAAAAAATGGAATTATGATGT
GGTTGTGGCAGAACAGTTTGATAATATAACAGCCGTTTTTAACAATCATCAACCACAGCTTGTGCTGTTAGATATCAATT
TACCTACTTTAAATGGTTTTCATTGGTGCCAAGAAATACGCAAAACATCAAATGTACCTATCATGTTTATTAGTTCGCGT
ATTGATAACATGGATCAAATTATGGCTATACAAATGGGTGGCGATGATTTTATTGAAAAACCATTCAATTTGTCATTAAC
TATTGCTAAAATTCAAGCGCTTTTAAGACGTACTTATGATCTAACAGTAGTCAATGATACGCTGACAGTCAAAGGGTGTA
CGCTAATATTAGATGAGGCTAAGGTTGCTTATCAAGGGGAGAGTATACAGCTGTCTTTGACGGAATTACAAATTTTAAAA
TTGTTGTTCCAAAGCGAAGACAAGTATGTGAGTCGAACAGCTTTAATTGAAAAATGCTGGGAGTCTGAAAACTTCATAGA
TGATAATACATTAGCAGTAAATATGACACGTCTACGTAAAAAATTAAGTACTATAGGCCTCAATGATTTTATCACTACCA
AGAAAAATGTTGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

90.95

100

0.91