Detailed information NTG0062545

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FNL60_RS10265
• Genome accession: NZ_AP019720
• Coordinates: 2005088..2006179 (+)
• Length: 363 a.a.
• NCBI ID: WP_002264240.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain NBRC 13955
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2000088..2011179

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNL60_RS10240 (SM3g_18910)	pgsA	2000507..2001049 (-)	543	WP_002267084.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
FNL60_RS10245 (SM3g_18920)	-	2001061..2002038 (-)	978	WP_002267085.1	helix-turn-helix domain-containing protein	-
FNL60_RS10250 (SM3g_18930)	yfmH	2002111..2003403 (-)	1293	WP_002264239.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
FNL60_RS10255 (SM3g_18940)	yfmF	2003405..2004652 (-)	1248	WP_002279892.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
FNL60_RS10260 (SM3g_18950)	yaaA	2004720..2005085 (+)	366	WP_002267087.1	S4 domain-containing protein YaaA	-
FNL60_RS10265 (SM3g_18960)	recF	2005088..2006179 (+)	1092	WP_002264240.1	DNA replication/repair protein RecF	Machinery gene
FNL60_RS10270 (SM3g_18970)	guaB	2006342..2007823 (-)	1482	WP_002279893.1	IMP dehydrogenase	-
FNL60_RS10275 (SM3g_18980)	trpS	2007980..2009002 (-)	1023	WP_002264241.1	tryptophan--tRNA ligase	-
FNL60_RS10280 (SM3g_18990)	-	2009436..2011055 (+)	1620	WP_002279894.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 42042.29 Da
• Isoelectric Point: 9.8334

>NTDB_id=62545 FNL60_RS10265 WP_002264240.1 2005088..2006179(+) (recF) [Streptococcus mutans strain NBRC 13955]
MWIEKINLKHYRNYTAIESEFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKELIQFGQKELNVSGLLNRVNGK
IPLEINLSNKGRTTKINYLKQPKLSDYIGTMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPIYLSDLSNYNHVLKQR
NAYLKSEKKVDTDFLFVLDEQLVDYGSKVIEHRLDFIQNLTKEADKYHFSISNQQEHLKISYLSSVKFDHKKNIRDNFLN
LLQKNRQGDIFKKNTSVGPHRDDLAFFINQMNANFGSQGQHRSLILSLKLAEIELIKTVTGDYPILLLDDVMSELDNYRQ
IKLLEGIKDNVQTFITTTSLEHLQQLPKKLKLFTINQGKVLSE

Nucleotide

• Length: 1092 bp

>NTDB_id=62545 FNL60_RS10265 WP_002264240.1 2005088..2006179(+) (recF) [Streptococcus mutans strain NBRC 13955]
ATGTGGATAGAAAAAATTAATTTAAAACATTATCGCAATTATACAGCCATTGAATCTGAATTTTCCCAAAGTCTTAATGT
TTTTGTGGGACAAAATGCTCAAGGAAAAACCAATTTCCTAGAGGCTATTTATTTTTTATCTTTAACCCGCAGTCATCGAA
CACGATCTGACAAAGAACTTATTCAATTTGGTCAAAAAGAATTAAATGTTTCTGGCCTTCTTAATCGTGTCAATGGCAAA
ATTCCTCTGGAAATCAACTTATCTAATAAAGGCCGAACAACAAAAATAAATTATCTCAAACAACCTAAACTTTCAGACTA
TATTGGAACAATGACTGTTGTTCTCTTTGCTCCAGAAGATCTTCAACTAATAAAAGGCTCCCCAAGTCTCAGAAGAAAGT
TTATTGACATTGATTTAGGACAAATCAAGCCTATTTACTTATCTGATTTATCAAATTATAATCATGTTCTTAAACAACGA
AATGCCTATTTAAAATCAGAGAAGAAGGTTGATACTGATTTTCTTTTCGTTCTAGATGAACAATTGGTAGATTATGGTAG
TAAGGTTATTGAGCATCGCCTTGATTTTATTCAAAATTTAACTAAAGAAGCTGATAAATATCATTTCTCTATTTCAAATC
AACAGGAACATTTAAAAATTTCCTACCTTTCTTCTGTTAAATTTGATCATAAAAAAAATATTCGTGATAACTTTTTAAAC
CTGCTACAAAAAAATCGGCAGGGTGATATTTTCAAAAAGAACACCAGTGTTGGTCCGCACCGCGATGATTTAGCCTTTTT
CATCAATCAAATGAACGCTAACTTTGGTAGTCAAGGACAACATCGCAGCCTTATTTTATCTTTAAAGCTGGCTGAGATTG
AACTTATAAAAACAGTCACTGGGGATTATCCTATTCTCTTGTTAGATGATGTCATGAGTGAACTTGATAATTATAGACAA
ATCAAACTTTTAGAAGGCATCAAAGATAATGTTCAGACCTTTATAACAACAACTAGCCTTGAACATCTTCAACAACTCCC
TAAGAAACTAAAGTTATTTACTATCAACCAAGGAAAAGTGCTATCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	64.722	99.174	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	43.902	100	0.446