Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   N288_RS12795 Genome accession   NC_022524
Coordinates   2548183..2549940 (-) Length   585 a.a.
NCBI ID   WP_009793489.1    Uniprot ID   U5L9Y2
Organism   Bacillus infantis NRRL B-14911     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2543183..2554940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N288_RS12775 (N288_13790) - 2543629..2544165 (-) 537 WP_009793494.1 GNAT family N-acetyltransferase -
  N288_RS12780 (N288_13795) - 2544264..2545358 (-) 1095 WP_009793493.1 threonine aldolase family protein -
  N288_RS12785 (N288_13800) - 2545474..2545728 (-) 255 WP_009793491.1 DUF3949 domain-containing protein -
  N288_RS12790 (N288_13805) rcrQ 2546361..2548190 (-) 1830 WP_009793490.1 ABC transporter ATP-binding protein Regulator
  N288_RS12795 (N288_13810) rcrP 2548183..2549940 (-) 1758 WP_009793489.1 ABC transporter ATP-binding protein Regulator
  N288_RS12800 (N288_13815) - 2550018..2550443 (-) 426 WP_009793488.1 MarR family winged helix-turn-helix transcriptional regulator -
  N288_RS25400 (N288_13820) - 2550597..2550737 (+) 141 WP_022543939.1 hypothetical protein -
  N288_RS12805 (N288_13825) - 2550807..2551529 (-) 723 WP_022543940.1 sensor histidine kinase -
  N288_RS12810 (N288_13830) - 2551765..2552004 (+) 240 WP_009793485.1 hypothetical protein -
  N288_RS12815 (N288_13835) - 2552106..2552834 (+) 729 WP_009793484.1 ZIP family metal transporter -
  N288_RS12820 (N288_13840) - 2552961..2553224 (+) 264 WP_009793483.1 CotD family spore coat protein -
  N288_RS12825 (N288_13845) - 2553258..2553455 (-) 198 WP_009793482.1 hypothetical protein -
  N288_RS24315 (N288_13850) - 2553465..2553920 (-) 456 WP_022543941.1 hypothetical protein -
  N288_RS12835 (N288_13855) - 2553917..2554468 (-) 552 WP_009793480.1 DinB family protein -
  N288_RS12840 (N288_13860) - 2554621..2554866 (+) 246 WP_009793479.1 DUF2164 domain-containing protein -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64562.19 Da        Isoelectric Point: 5.8917

>NTDB_id=62506 N288_RS12795 WP_009793489.1 2548183..2549940(-) (rcrP) [Bacillus infantis NRRL B-14911]
MLAMFKHFKGKDWLLVLCSLIFIIVQVWLDLKLPEYMHEITMLVQTEGSSMGDVLIQGAYMLLCAIGSMAAAMIVGFFAA
QVAAGFAVRLRGMVFEKTMSFSMEEINGFSTPSLITRSTNDITQIQLLIAVGLQAIVKAPILAVWAILKIMGKSWQWTAA
TGIAVAVLMVMLAVIIVIALPKFKVIQTLTDNLNRVTRENLTGIRVVRAYNAEEYQEDKFEKANSELTRTNLFTGRTMAI
MMPVMTLIMSGINLAIYWIGAFIINNAATPDKLTLFSDMVVFSSYSMQVIMAFMMLSIIFVMLPRATVSAKRINEVLQTD
SKILDGTLKGNDSKAAGEIEFRNVSFKYPDAADYILKNISFTAHKGETVAFIGSTGSGKSTLLNLIPRFYDATEGEVLVD
GINVKEYRQEDLRNKLGYVSQKAVLFSGTVSENIAYGTGGTEPGEKIERAAEIAQASEFVEKLGDQYQGVISQGGTNLSG
GQKQRLSIARAIYKQPEIYLFDDSFSALDYKTDRRLRSLLKKETSDSTTLIVAQRIGTIKDADRIVVLDQGKVVGIGTHE
ELLDGCSVYQEIAYSQLSKEELEIG

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=62506 N288_RS12795 WP_009793489.1 2548183..2549940(-) (rcrP) [Bacillus infantis NRRL B-14911]
ATGCTTGCTATGTTTAAGCATTTTAAAGGGAAAGATTGGCTGCTTGTCCTGTGCAGCCTCATATTTATCATTGTACAGGT
CTGGCTTGACTTAAAGCTGCCTGAATATATGCATGAAATCACCATGCTTGTCCAGACAGAAGGCAGCAGTATGGGTGATG
TCCTTATTCAGGGCGCTTACATGCTTTTATGTGCCATCGGCAGTATGGCTGCTGCCATGATAGTCGGTTTTTTTGCCGCA
CAGGTGGCTGCCGGATTTGCCGTACGGCTGCGCGGAATGGTGTTTGAAAAAACAATGTCGTTTTCTATGGAGGAGATCAA
TGGGTTCTCAACCCCAAGTTTGATCACGCGCTCCACCAATGATATCACCCAGATTCAGCTGCTGATCGCTGTTGGATTGC
AGGCGATTGTTAAGGCGCCGATACTGGCTGTTTGGGCAATTTTGAAAATTATGGGCAAAAGCTGGCAGTGGACTGCAGCG
ACCGGGATTGCTGTTGCCGTTCTTATGGTGATGCTCGCTGTCATCATTGTCATAGCGCTCCCTAAATTTAAAGTGATCCA
GACTTTAACAGACAACCTGAATCGCGTGACCAGGGAAAACCTCACTGGAATCCGGGTAGTCAGAGCCTATAATGCTGAGG
AATACCAGGAAGATAAGTTTGAAAAGGCAAACAGTGAGCTGACGAGGACCAATCTTTTTACAGGAAGGACCATGGCGATC
ATGATGCCGGTTATGACATTGATCATGTCGGGAATCAATCTTGCCATCTATTGGATCGGTGCCTTTATCATCAACAATGC
TGCTACACCAGATAAACTGACCCTTTTCTCTGATATGGTCGTGTTCTCTTCTTACAGCATGCAGGTCATAATGGCCTTCA
TGATGCTGTCGATCATCTTTGTGATGCTGCCGCGTGCGACGGTATCCGCAAAGAGGATCAATGAGGTGCTGCAAACAGAT
TCCAAAATCCTTGACGGCACCTTAAAAGGGAATGATTCAAAAGCTGCAGGGGAGATTGAATTCCGGAATGTCAGCTTCAA
ATATCCGGATGCGGCGGATTATATCCTGAAGAATATCAGCTTTACCGCCCATAAAGGGGAGACTGTCGCTTTTATCGGAT
CAACAGGCAGCGGGAAAAGCACCTTGCTCAACCTGATTCCCCGCTTTTATGATGCGACAGAAGGCGAAGTGCTGGTCGAT
GGCATCAACGTAAAAGAATACAGGCAGGAAGATCTCCGCAATAAGCTTGGCTACGTTTCGCAAAAGGCTGTATTGTTCAG
CGGCACAGTATCGGAAAATATCGCCTACGGCACCGGCGGGACAGAACCTGGAGAGAAGATAGAAAGAGCGGCAGAAATAG
CGCAGGCCTCTGAATTTGTTGAAAAGCTGGGAGACCAGTATCAAGGCGTGATTTCCCAGGGAGGAACCAATCTTTCAGGA
GGCCAGAAGCAGAGGCTGTCCATTGCCAGGGCCATTTATAAGCAGCCGGAAATTTATCTGTTTGATGATTCCTTCTCGGC
ACTTGATTATAAAACAGACAGGCGGCTGCGGTCACTTTTGAAAAAAGAAACCAGTGATAGCACCACCCTGATTGTGGCCC
AGCGGATCGGTACCATCAAAGACGCAGACCGCATCGTAGTCCTTGATCAAGGGAAGGTTGTCGGCATCGGAACACATGAA
GAATTGCTGGACGGCTGCAGCGTGTATCAGGAGATTGCCTATTCTCAGCTGTCAAAGGAGGAACTGGAAATTGGCTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-293)

ABC transporter (ABC_tran)

(356-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U5L9Y2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

54.591

100

0.559

Multiple sequence alignment