Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   N288_RS12790 Genome accession   NC_022524
Coordinates   2546361..2548190 (-) Length   609 a.a.
NCBI ID   WP_009793490.1    Uniprot ID   U5LB70
Organism   Bacillus infantis NRRL B-14911     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2541361..2553190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N288_RS12760 (N288_13775) - 2541621..2542508 (-) 888 WP_009793498.1 AraC family transcriptional regulator -
  N288_RS12765 (N288_13780) - 2542611..2542805 (-) 195 WP_009793497.1 hypothetical protein -
  N288_RS12770 (N288_13785) - 2542858..2543349 (-) 492 WP_009793496.1 GNAT family N-acetyltransferase -
  N288_RS12775 (N288_13790) - 2543629..2544165 (-) 537 WP_009793494.1 GNAT family N-acetyltransferase -
  N288_RS12780 (N288_13795) - 2544264..2545358 (-) 1095 WP_009793493.1 threonine aldolase family protein -
  N288_RS12785 (N288_13800) - 2545474..2545728 (-) 255 WP_009793491.1 DUF3949 domain-containing protein -
  N288_RS12790 (N288_13805) rcrQ 2546361..2548190 (-) 1830 WP_009793490.1 ABC transporter ATP-binding protein Regulator
  N288_RS12795 (N288_13810) rcrP 2548183..2549940 (-) 1758 WP_009793489.1 ABC transporter ATP-binding protein Regulator
  N288_RS12800 (N288_13815) - 2550018..2550443 (-) 426 WP_009793488.1 MarR family winged helix-turn-helix transcriptional regulator -
  N288_RS25400 (N288_13820) - 2550597..2550737 (+) 141 WP_022543939.1 hypothetical protein -
  N288_RS12805 (N288_13825) - 2550807..2551529 (-) 723 WP_022543940.1 sensor histidine kinase -
  N288_RS12810 (N288_13830) - 2551765..2552004 (+) 240 WP_009793485.1 hypothetical protein -
  N288_RS12815 (N288_13835) - 2552106..2552834 (+) 729 WP_009793484.1 ZIP family metal transporter -

Sequence

Protein


Download         Length: 609 a.a.        Molecular weight: 66998.67 Da        Isoelectric Point: 6.8478

>NTDB_id=62505 N288_RS12790 WP_009793490.1 2546361..2548190(-) (rcrQ) [Bacillus infantis NRRL B-14911]
MADKKYNRKRPGKKGGPGAKGPEGGQKPKNFKKTIKKLVSYCRAYLPFIVTALVLAMAASIFSIIGPDLLSRITDLIAEG
LMTEINLDEVVSIASILAFLYGLGFLFNYIQGFIMATVTQRVSKNLRSDLSSKMNRMPLKYFDSGSTGDVLSRVTNDVDL
IGQTMNQSLSTLVSAITMFLGSLVMMFYTNWIMAVSAILSTLIGFVFMSFLISKSQKYFAQQQAELGRLNGHIEEIYSGH
SVVKVYNGEPEAKATFHKINTRLYESAWKSQFLSGLMMPIMMFVGNLGYVVVCVAGAVLAVNGSITFGVIVAFMIYIRLF
TQPLSQLAQAAANLQATAAASERVFEFLAEDELENEDNKKTVLNDVKGEVEFKNVRFGYSEDKMIINDFSALAKSGQKVA
IVGPTGAGKTTIINLLMRFYEVSGGEILIDGVPTKELSREKLRSLFCMVLQDTWLFEGTIRENIVYSRKGVSDQEVAEAA
KAVGLHHFIQTLPMGYDTILDDKANLSAGQKQLITIARAMVKDAPLLILDEATSSVDTRTEVLIQEAMDKLTAGKTSFVI
AHRLSTIKNADLILVMKDGDIIESGNHEELLGQNGFYADLYNSQFEDAS

Nucleotide


Download         Length: 1830 bp        

>NTDB_id=62505 N288_RS12790 WP_009793490.1 2546361..2548190(-) (rcrQ) [Bacillus infantis NRRL B-14911]
TTGGCTGATAAAAAATATAACCGCAAAAGGCCAGGAAAAAAGGGCGGACCAGGTGCCAAAGGGCCGGAAGGCGGTCAAAA
ACCGAAGAATTTCAAGAAGACTATAAAGAAGCTGGTTTCCTATTGCAGGGCCTATCTGCCGTTTATTGTGACTGCCCTTG
TTCTGGCAATGGCAGCATCCATCTTCAGCATCATCGGCCCGGACCTTCTCAGCAGGATCACTGACCTGATTGCAGAAGGG
CTGATGACAGAAATCAATTTGGATGAGGTAGTGAGTATTGCTTCCATCCTCGCCTTTTTATATGGCCTGGGTTTTCTGTT
CAATTATATTCAGGGATTCATCATGGCAACAGTTACCCAGCGGGTATCCAAAAACTTAAGGAGCGATTTATCCTCTAAAA
TGAACCGGATGCCTTTGAAATACTTTGATTCAGGCAGCACCGGAGATGTTCTCAGCCGCGTGACAAATGACGTCGACCTG
ATCGGGCAGACGATGAACCAGAGCTTAAGCACATTGGTATCAGCCATAACGATGTTCCTCGGCTCACTCGTCATGATGTT
CTATACAAATTGGATCATGGCTGTCTCTGCCATCCTTTCAACATTGATCGGTTTTGTGTTTATGAGTTTCTTAATATCCA
AGTCCCAGAAATACTTTGCCCAGCAGCAGGCAGAGCTGGGAAGGCTAAACGGACATATTGAAGAAATATATTCAGGGCAC
AGCGTGGTAAAAGTATATAACGGAGAGCCGGAAGCTAAGGCAACTTTCCACAAAATCAATACAAGGCTGTATGAAAGCGC
CTGGAAGTCTCAGTTCCTTTCTGGGCTCATGATGCCGATCATGATGTTCGTCGGCAACTTAGGCTATGTCGTTGTATGTG
TGGCAGGTGCAGTATTGGCTGTAAATGGATCAATAACATTTGGAGTCATCGTCGCATTCATGATCTATATCAGATTGTTC
ACCCAGCCGCTTTCCCAGCTTGCACAGGCAGCGGCAAACCTTCAGGCCACCGCAGCTGCAAGTGAGCGTGTGTTTGAGTT
TTTGGCTGAAGATGAGCTGGAAAATGAAGATAATAAGAAAACAGTTCTCAATGATGTCAAAGGAGAAGTTGAATTTAAAA
ATGTCCGCTTTGGCTACAGCGAAGATAAAATGATTATCAATGATTTTTCTGCTCTCGCAAAATCAGGGCAAAAAGTGGCG
ATTGTCGGACCGACTGGGGCGGGAAAAACGACCATCATCAACCTGCTGATGCGCTTTTATGAAGTAAGCGGGGGAGAAAT
CCTGATCGATGGTGTGCCCACAAAAGAATTGAGCCGTGAAAAATTGCGAAGCCTGTTCTGCATGGTGCTTCAGGATACAT
GGCTGTTTGAAGGGACGATCCGTGAAAACATTGTCTATTCCAGAAAAGGGGTAAGTGATCAGGAGGTAGCGGAAGCTGCA
AAAGCCGTTGGCCTGCATCATTTTATCCAGACGCTGCCTATGGGATATGATACCATCCTCGATGATAAGGCAAATCTCTC
AGCAGGACAGAAGCAGTTAATTACGATAGCACGGGCCATGGTAAAAGATGCACCGCTCCTGATTCTGGATGAAGCAACAA
GCTCTGTAGACACACGCACAGAAGTGTTGATCCAGGAGGCAATGGATAAGCTGACAGCAGGCAAAACATCCTTCGTCATA
GCCCACAGGCTGTCCACCATCAAAAACGCCGACCTGATTCTCGTCATGAAAGATGGGGACATCATCGAAAGCGGAAATCA
CGAGGAACTGCTGGGGCAGAATGGCTTTTATGCCGATTTGTATAATAGCCAGTTTGAGGATGCTTCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(51-324)

ABC transporter (ABC_tran)

(388-534)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U5LB70

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

57.118

94.581

0.54

Multiple sequence alignment