Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrR   Type   Regulator
Locus tag   FNL60_RS06075 Genome accession   NZ_AP019720
Coordinates   1179001..1179435 (-) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   Q8DUK6
Organism   Streptococcus mutans strain NBRC 13955     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1174001..1184435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL60_RS06055 (SM3g_11170) - 1174157..1174603 (-) 447 WP_025985889.1 hypothetical protein -
  FNL60_RS06060 (SM3g_11180) tpx 1174769..1175254 (-) 486 WP_002263295.1 thiol peroxidase -
  FNL60_RS06065 (SM3g_11190) rcrQ 1175451..1177205 (-) 1755 WP_002280030.1 ABC transporter ATP-binding protein Regulator
  FNL60_RS06070 (SM3g_11200) rcrP 1177195..1178997 (-) 1803 WP_002280031.1 ABC transporter ATP-binding protein Regulator
  FNL60_RS06075 (SM3g_11210) rcrR 1179001..1179435 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FNL60_RS06080 (SM3g_11220) queC 1179987..1180640 (+) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  FNL60_RS06085 (SM3g_11230) queD 1180640..1181086 (+) 447 WP_002263290.1 6-carboxytetrahydropterin synthase QueD -
  FNL60_RS06090 (SM3g_11240) queE 1181083..1181799 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  FNL60_RS06095 (SM3g_11250) queF 1181812..1182300 (+) 489 WP_002280032.1 preQ(1) synthase -
  FNL60_RS06100 (SM3g_11260) - 1182409..1182792 (+) 384 WP_002265142.1 DUF3021 family protein -
  FNL60_RS06105 (SM3g_11270) gdhA 1182904..1184253 (-) 1350 WP_002280033.1 NADP-specific glutamate dehydrogenase -

Sequence


Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=62497 FNL60_RS06075 WP_002263292.1 1179001..1179435(-) (rcrR) [Streptococcus mutans strain NBRC 13955]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=62497 FNL60_RS06075 WP_002263292.1 1179001..1179435(-) (rcrR) [Streptococcus mutans strain NBRC 13955]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGGAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains


Predicted by InterProScan.

(31-89)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DUK6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1


Multiple sequence alignment