Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FNL60_RS06070 Genome accession   NZ_AP019720
Coordinates   1177195..1178997 (-) Length   600 a.a.
NCBI ID   WP_002280031.1    Uniprot ID   -
Organism   Streptococcus mutans strain NBRC 13955     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1172195..1183997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL60_RS06045 (SM3g_11150) - 1172617..1173303 (-) 687 WP_002263646.1 response regulator transcription factor -
  FNL60_RS06050 (SM3g_11160) - 1173304..1173927 (-) 624 WP_002264331.1 GTP pyrophosphokinase family protein -
  FNL60_RS06055 (SM3g_11170) - 1174157..1174603 (-) 447 WP_025985889.1 hypothetical protein -
  FNL60_RS06060 (SM3g_11180) tpx 1174769..1175254 (-) 486 WP_002263295.1 thiol peroxidase -
  FNL60_RS06065 (SM3g_11190) rcrQ 1175451..1177205 (-) 1755 WP_002280030.1 ABC transporter ATP-binding protein Regulator
  FNL60_RS06070 (SM3g_11200) rcrP 1177195..1178997 (-) 1803 WP_002280031.1 ABC transporter ATP-binding protein Regulator
  FNL60_RS06075 (SM3g_11210) rcrR 1179001..1179435 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FNL60_RS06080 (SM3g_11220) queC 1179987..1180640 (+) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  FNL60_RS06085 (SM3g_11230) queD 1180640..1181086 (+) 447 WP_002263290.1 6-carboxytetrahydropterin synthase QueD -
  FNL60_RS06090 (SM3g_11240) queE 1181083..1181799 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  FNL60_RS06095 (SM3g_11250) queF 1181812..1182300 (+) 489 WP_002280032.1 preQ(1) synthase -
  FNL60_RS06100 (SM3g_11260) - 1182409..1182792 (+) 384 WP_002265142.1 DUF3021 family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66940.71 Da        Isoelectric Point: 9.6602

>NTDB_id=62496 FNL60_RS06070 WP_002280031.1 1177195..1178997(-) (rcrP) [Streptococcus mutans strain NBRC 13955]
MFKIFKRLNAKEWGMVLLSTAFICLAVWMDLKTPEYMSNITTLLQTKGTTASDIMDPGSKMLMFSFGSFFMAVLVGFLAS
RTAASFTTRLRSDIFNRVMDYSEAEIKKFSIPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAVWALTKIWGKSDEWTGA
VGVAVLIVFIMLSVLMFVAFPRQRQVQSLTDALNSTTRESLTGVRVVRAYNAEDYQDTKFKRENKNLTKLNLLVYRLMSL
MNPVMTVVSSGLTLAIYWIGAYLLNDIKIPMTSVTAAKGAIADRISVFSDMVVFSSYAMQVVVGFMMMVAVFIILPRALV
SAKRINEVLALNSSVHFKEYSKADNARKGEVEFHDVSFRYSKNSRAVIEHVSFSAKAGETVAFIGSTGSGKSTLVNLIPR
FYDATEGWIKIDGIKVQDYSHDDLNNKVGYIPQRAVLFSGTIRSNIAFGQSDQAPLDDAKIWEALELAQAKNFVEEKEKG
LDTEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILRNDLAKKTKDMTKLIVAQRISTIMDADHIL
VLDQGKVVGQGTHKELLANNDIYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=62496 FNL60_RS06070 WP_002280031.1 1177195..1178997(-) (rcrP) [Streptococcus mutans strain NBRC 13955]
ATGTTTAAAATTTTTAAACGTCTAAATGCTAAAGAATGGGGCATGGTTCTCCTTAGTACTGCCTTTATCTGTTTGGCTGT
CTGGATGGATTTGAAGACGCCCGAATATATGTCCAACATTACAACCTTGCTGCAGACTAAGGGAACGACCGCCTCAGATA
TTATGGATCCGGGATCTAAGATGCTCATGTTTTCATTTGGGAGCTTTTTTATGGCCGTTCTAGTTGGTTTTTTAGCTTCA
AGAACAGCTGCTAGCTTTACGACCCGTCTTCGATCTGATATTTTCAATCGGGTTATGGATTATTCAGAGGCGGAAATCAA
GAAATTTTCCATTCCCAGCCTTCTAACGCGTACGACTAATGATTTGACACAGTTGCAAATCATGATCGTTATGGGAATGC
AAGTGGTGACACGCGGTCCAATCATGGCTGTTTGGGCCTTGACTAAAATCTGGGGTAAAAGCGATGAATGGACAGGAGCA
GTCGGTGTTGCCGTTTTAATTGTCTTTATTATGCTGTCTGTTTTGATGTTTGTCGCTTTTCCAAGACAGCGTCAGGTGCA
GAGCTTGACGGATGCTCTAAATTCTACAACCCGTGAATCTCTGACTGGTGTTCGTGTTGTTCGGGCTTACAATGCAGAAG
ATTATCAGGACACTAAATTTAAGCGGGAAAATAAAAACCTGACGAAATTGAATTTATTGGTCTATCGTCTGATGTCGCTA
ATGAATCCTGTCATGACAGTTGTTTCCAGTGGTCTAACTTTAGCTATTTATTGGATTGGAGCTTACCTGCTCAATGATAT
TAAAATTCCTATGACGAGTGTGACAGCTGCTAAAGGAGCTATTGCTGATCGTATCAGTGTTTTTAGTGATATGGTTGTCT
TTTCATCTTATGCCATGCAGGTTGTTGTCGGTTTTATGATGATGGTCGCTGTCTTTATCATTTTACCGCGTGCTTTAGTT
TCTGCCAAACGAATTAATGAAGTATTGGCGCTTAACTCATCTGTACACTTCAAAGAATATTCTAAAGCAGACAATGCTCG
AAAAGGAGAAGTCGAATTTCATGATGTATCGTTTCGTTACAGTAAAAATTCTCGTGCGGTTATTGAGCATGTGTCTTTCA
GTGCCAAAGCTGGTGAGACAGTTGCTTTTATTGGTTCCACTGGCTCAGGAAAATCAACTCTTGTTAATCTGATTCCTCGT
TTTTATGATGCTACAGAAGGTTGGATTAAGATAGATGGAATCAAAGTGCAAGATTACAGCCATGATGACCTCAACAATAA
AGTCGGCTATATTCCGCAAAGGGCAGTGCTTTTTAGTGGGACCATTCGTTCTAATATTGCATTTGGGCAAAGCGATCAAG
CGCCGCTTGATGATGCTAAAATTTGGGAGGCTCTTGAACTAGCCCAAGCCAAAAACTTTGTTGAAGAAAAAGAAAAGGGT
CTGGATACCGAGGTAGCTCAAGGCGGTACCAACTTCTCTGGCGGTCAAAAGCAGCGCTTAGCTATTGCCCGTGCACTTGC
ACGCAAACCAGAAATTCTTATTTTTGATGACTCCTTCTCAGCTCTTGATTATAAGACGGATCGCATTCTGCGAAATGATT
TGGCAAAGAAAACCAAAGACATGACTAAGCTGATTGTCGCCCAACGTATTTCAACTATTATGGATGCTGATCATATTTTA
GTCTTAGATCAAGGAAAGGTTGTTGGTCAAGGAACACACAAGGAATTACTGGCTAATAACGATATTTATCAAGAAATTGC
TTATTCACAACTATCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(369-518)

ABC transporter transmembrane region (ABC_membrane)

(17-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

99.667

100

0.997

Multiple sequence alignment