Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FNL60_RS06065 Genome accession   NZ_AP019720
Coordinates   1175451..1177205 (-) Length   584 a.a.
NCBI ID   WP_002280030.1    Uniprot ID   -
Organism   Streptococcus mutans strain NBRC 13955     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1170451..1182205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL60_RS06035 (SM3g_11130) - 1170972..1171322 (+) 351 WP_002263648.1 DUF1304 domain-containing protein -
  FNL60_RS06040 (SM3g_11140) - 1171379..1172611 (-) 1233 WP_002280028.1 sensor histidine kinase -
  FNL60_RS06045 (SM3g_11150) - 1172617..1173303 (-) 687 WP_002263646.1 response regulator transcription factor -
  FNL60_RS06050 (SM3g_11160) - 1173304..1173927 (-) 624 WP_002264331.1 GTP pyrophosphokinase family protein -
  FNL60_RS06055 (SM3g_11170) - 1174157..1174603 (-) 447 WP_025985889.1 hypothetical protein -
  FNL60_RS06060 (SM3g_11180) tpx 1174769..1175254 (-) 486 WP_002263295.1 thiol peroxidase -
  FNL60_RS06065 (SM3g_11190) rcrQ 1175451..1177205 (-) 1755 WP_002280030.1 ABC transporter ATP-binding protein Regulator
  FNL60_RS06070 (SM3g_11200) rcrP 1177195..1178997 (-) 1803 WP_002280031.1 ABC transporter ATP-binding protein Regulator
  FNL60_RS06075 (SM3g_11210) rcrR 1179001..1179435 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FNL60_RS06080 (SM3g_11220) queC 1179987..1180640 (+) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  FNL60_RS06085 (SM3g_11230) queD 1180640..1181086 (+) 447 WP_002263290.1 6-carboxytetrahydropterin synthase QueD -
  FNL60_RS06090 (SM3g_11240) queE 1181083..1181799 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64603.66 Da        Isoelectric Point: 5.7674

>NTDB_id=62495 FNL60_RS06065 WP_002280030.1 1175451..1177205(-) (rcrQ) [Streptococcus mutans strain NBRC 13955]
MENKKKSLLSQMAPYLKGYKALFGLAVIFTIVSSTITVIGPDRLKEMTDTMTKGLAGKIDLDKIGEIALTLALLYFAGAL
VSYTASFIVSTLIQKFSQRLRNAIADKINKVPLKYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVSMVAAIILLIGSIFMM
IKTNGALAATAILSVFAGFVLSTVIMAKSQPLFKKQQANLADVSGYVEEVYSGHNVVSSYNAIQQSKKQFENLNDQLFAS
MWKSQFFSGIMMPLMQFIGNFGYVMVCIVGATMAINGDITMGTIVAFMTYVRIFTQPIAQIAQGITQLQSANAAMGRVFE
FLDEEEIEDENHKVKQLEKVEGNVNFDNVFFGYSPDKTIIHDFSAHAKAGQKIAIVGPTGAGKTTIVNLLMRFYEVDRGM
ISIDGVNIHDMTREEVHDAFAMVLQDTWLFEGTVKENLIYNQKHIIDEQVIAAAKAVGVHHFIKTLPKGYDTVLDDSVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQRAMDHLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGS
HDQLMAENGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=62495 FNL60_RS06065 WP_002280030.1 1175451..1177205(-) (rcrQ) [Streptococcus mutans strain NBRC 13955]
ATGGAAAATAAGAAGAAATCATTATTAAGCCAAATGGCTCCTTACCTTAAAGGCTATAAGGCTTTATTTGGACTTGCTGT
CATTTTTACTATCGTTTCAAGTACGATTACTGTTATTGGACCTGACCGGCTGAAAGAGATGACAGATACCATGACCAAAG
GGCTGGCAGGAAAAATTGATTTAGATAAAATCGGTGAGATTGCTCTAACCTTGGCTCTCTTATACTTTGCTGGTGCTTTG
GTTTCTTATACTGCTAGCTTTATTGTGTCCACTTTGATTCAAAAGTTTTCGCAACGTCTGCGCAATGCCATTGCAGATAA
AATCAATAAGGTACCGCTCAAATATTTTGATAGCCATTCACAAGGAGATACCTTGTCTCGAGTGACCAATGATGTGGATT
TAATGACACAGTCTTTCAACCAAAGTTTAGTTTCAATGGTAGCAGCTATAATTCTCCTGATTGGCTCTATTTTCATGATG
ATTAAAACCAATGGAGCTCTTGCAGCGACCGCTATTTTGTCTGTTTTTGCTGGTTTTGTGTTATCCACTGTTATCATGGC
CAAGAGCCAGCCGCTTTTTAAAAAGCAACAAGCTAATCTAGCCGATGTCAGCGGTTATGTTGAAGAGGTCTATTCAGGTC
ATAATGTGGTTTCTAGTTACAATGCGATTCAGCAAAGCAAGAAGCAGTTTGAAAACTTGAATGACCAATTATTTGCAAGT
ATGTGGAAATCACAATTCTTTTCTGGAATTATGATGCCCCTTATGCAATTCATCGGAAATTTTGGGTATGTCATGGTCTG
TATTGTCGGTGCTACCATGGCTATTAACGGCGATATTACTATGGGAACGATTGTTGCCTTTATGACTTACGTCCGTATTT
TTACTCAGCCCATTGCGCAGATTGCTCAAGGAATCACTCAATTGCAATCAGCTAATGCTGCTATGGGACGTGTCTTTGAA
TTTCTTGATGAGGAAGAAATAGAAGACGAAAACCATAAAGTTAAACAACTTGAAAAAGTTGAAGGAAATGTTAATTTTGA
CAATGTTTTCTTTGGTTATAGTCCTGATAAAACTATTATTCATGATTTCTCGGCTCATGCTAAGGCTGGTCAAAAAATTG
CTATTGTGGGACCGACTGGTGCGGGTAAGACAACGATTGTTAACTTACTTATGCGTTTCTATGAGGTTGATAGAGGGATG
ATTTCTATTGATGGAGTTAATATCCATGATATGACACGAGAAGAAGTGCATGATGCTTTTGCCATGGTACTCCAAGATAC
TTGGCTCTTTGAAGGTACAGTTAAGGAAAATCTGATTTATAATCAAAAACATATTATTGATGAGCAAGTGATTGCAGCAG
CTAAGGCAGTTGGTGTTCATCATTTCATCAAGACTTTACCTAAGGGTTATGATACTGTTTTAGATGATTCGGTCACCTTA
TCAGTCGGTCAAAAACAACTCTTGACCATTGCACGTGCTCTCCTTAAAGATGCACCGCTTCTGATACTTGATGAAGCAAC
TTCCTCTGTTGATACTCGTACGGAAGAACTTATTCAAAGGGCTATGGATCATTTGATGGAGGGGCGGACATCATTCGTTA
TTGCCCATCGTCTGTCAACTATTCGCAATGCTGATCTTATTCTTGTCATGAGAGATGGTAATATTATTGAACAAGGCAGC
CATGACCAATTGATGGCAGAAAATGGCTTCTATGCCGATCTCTATAATAGTCAATTTACAGAAGAAGTGGCTTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

99.658

100

0.997

Multiple sequence alignment