Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   N288_RS07030 Genome accession   NC_022524
Coordinates   1367135..1367326 (+) Length   63 a.a.
NCBI ID   WP_009794082.1    Uniprot ID   U5L7N6
Organism   Bacillus infantis NRRL B-14911     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1362135..1372326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N288_RS07010 (N288_07525) - 1363795..1363986 (-) 192 WP_022543604.1 YjzD family protein -
  N288_RS07015 (N288_07530) - 1364179..1364916 (+) 738 WP_022543605.1 hydrolase -
  N288_RS07020 (N288_07535) - 1365127..1365933 (+) 807 WP_009794079.1 NAD(P)-dependent oxidoreductase -
  N288_RS07025 (N288_07545) med 1366151..1367113 (+) 963 WP_009794081.1 BMP family ABC transporter substrate-binding protein Regulator
  N288_RS07030 (N288_07550) comZ 1367135..1367326 (+) 192 WP_009794082.1 ComZ family protein Regulator
  N288_RS07035 (N288_07555) - 1367404..1367754 (-) 351 WP_009794083.1 hypothetical protein -
  N288_RS07040 (N288_07560) - 1367981..1368919 (+) 939 WP_009794084.1 beta-ketoacyl-ACP synthase III -
  N288_RS07045 (N288_07565) fabF 1369001..1370242 (+) 1242 WP_009794085.1 beta-ketoacyl-ACP synthase II -
  N288_RS07050 (N288_07570) - 1370389..1371165 (+) 777 WP_009794086.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7311.40 Da        Isoelectric Point: 4.0275

>NTDB_id=62494 N288_RS07030 WP_009794082.1 1367135..1367326(+) (comZ) [Bacillus infantis NRRL B-14911]
MQSNDKTMEFMQIAMKYMPEAQQELEKAGIELSLEMIQPFMTLFTKVMNEAYELGRQDAQSGE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=62494 N288_RS07030 WP_009794082.1 1367135..1367326(+) (comZ) [Bacillus infantis NRRL B-14911]
ATGCAATCCAATGATAAAACGATGGAGTTTATGCAAATAGCCATGAAATATATGCCTGAAGCCCAGCAGGAGCTGGAAAA
GGCAGGTATTGAGCTGTCGCTCGAGATGATCCAGCCATTTATGACACTTTTCACAAAAGTTATGAATGAGGCATACGAGC
TAGGCAGGCAGGATGCCCAAAGCGGGGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U5L7N6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

68.966

92.063

0.635

Multiple sequence alignment