Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   FNL60_RS05670 Genome accession   NZ_AP019720
Coordinates   1090785..1091456 (-) Length   223 a.a.
NCBI ID   WP_002263237.1    Uniprot ID   Q8DUD1
Organism   Streptococcus mutans strain NBRC 13955     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1085785..1096456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL60_RS05650 (SM3g_10380) - 1086874..1087563 (+) 690 WP_002269136.1 GntR family transcriptional regulator -
  FNL60_RS05655 (SM3g_10390) citG 1087569..1088459 (+) 891 WP_002265082.1 triphosphoribosyl-dephospho-CoA synthase CitG -
  FNL60_RS05660 (SM3g_10400) citC 1088635..1089684 (+) 1050 WP_002280281.1 [citrate (pro-3S)-lyase] ligase -
  FNL60_RS05665 (SM3g_10410) - 1089835..1090788 (-) 954 WP_002280280.1 sensor histidine kinase -
  FNL60_RS05670 (SM3g_10420) braR 1090785..1091456 (-) 672 WP_002263237.1 DNA-binding response regulator Regulator
  FNL60_RS05675 (SM3g_10430) - 1091498..1093501 (-) 2004 WP_002280279.1 ABC transporter permease -
  FNL60_RS05680 (SM3g_10440) - 1093503..1094255 (-) 753 WP_002263239.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 223 a.a.        Molecular weight: 25802.90 Da        Isoelectric Point: 5.1691

>NTDB_id=62490 FNL60_RS05670 WP_002263237.1 1090785..1091456(-) (braR) [Streptococcus mutans strain NBRC 13955]
MLKQEKIYLVEDDTTIVNLLKNHLGQHYQVKSVDNFRAILQEVKEFKPDLILMDITLPYFNGFYWTTEIRKSMTMPIIFI
SSADEEMNAVMAMNMGGDDFLSKPFSLPILDAKIAAFLRRANEFTKQGHQIEEFELTLDGVFSNLERQETIQLTPTETKI
LSLLIDYKGEVVTKEALLNRLWEGEEFIDQNTLSVNMTRLRKKVLSVSFDKIHTVRGVGYLIK

Nucleotide


Download         Length: 672 bp        

>NTDB_id=62490 FNL60_RS05670 WP_002263237.1 1090785..1091456(-) (braR) [Streptococcus mutans strain NBRC 13955]
ATGCTAAAGCAAGAAAAAATTTACTTGGTTGAAGATGATACAACCATTGTCAATCTTTTAAAGAATCATTTGGGACAACA
CTATCAAGTTAAAAGCGTTGATAACTTTAGGGCTATCTTGCAAGAAGTTAAAGAATTTAAACCCGATTTAATTCTGATGG
ATATTACTTTGCCCTATTTCAATGGCTTTTATTGGACTACTGAAATCAGAAAGAGCATGACCATGCCCATTATCTTTATT
TCCAGTGCTGATGAAGAAATGAATGCAGTAATGGCTATGAATATGGGAGGTGATGATTTTTTGAGCAAGCCTTTCTCGCT
GCCTATTTTGGATGCCAAAATCGCTGCTTTCTTGCGCCGTGCTAACGAGTTCACTAAGCAAGGCCATCAAATTGAAGAGT
TTGAATTAACGTTAGATGGTGTATTCTCAAATTTAGAAAGACAAGAGACTATCCAATTGACTCCAACAGAAACGAAAATT
CTTTCCTTACTTATTGATTATAAAGGAGAGGTTGTCACTAAGGAAGCTCTTCTCAACCGACTATGGGAGGGAGAGGAATT
TATTGATCAAAACACGCTTAGTGTTAATATGACACGTCTTCGTAAAAAGGTTCTATCAGTAAGTTTTGATAAGATTCATA
CAGTAAGAGGAGTAGGGTATTTAATTAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DUD1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

43.498

100

0.435


Multiple sequence alignment