Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LMK00_RS01985 Genome accession   NZ_CP086395
Coordinates   411228..411911 (+) Length   227 a.a.
NCBI ID   WP_165713158.1    Uniprot ID   A0A9Q9D7A9
Organism   Lactococcus formosensis strain I4/6O     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 406228..416911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LMK00_RS01975 (LMK00_01975) rpoC 406333..409980 (+) 3648 WP_017368839.1 DNA-directed RNA polymerase subunit beta' -
  LMK00_RS01980 (LMK00_01980) - 410072..410980 (-) 909 WP_096368633.1 diacylglycerol kinase family protein -
  LMK00_RS01985 (LMK00_01985) mecA 411228..411911 (+) 684 WP_165713158.1 adaptor protein MecA Regulator
  LMK00_RS01990 (LMK00_01990) - 411915..413171 (+) 1257 WP_096368631.1 MraY family glycosyltransferase -
  LMK00_RS01995 (LMK00_01995) sufC 413249..414019 (+) 771 WP_017368843.1 Fe-S cluster assembly ATPase SufC -
  LMK00_RS02000 (LMK00_02000) sufD 414089..415345 (+) 1257 WP_252175603.1 Fe-S cluster assembly protein SufD -
  LMK00_RS02005 (LMK00_02005) - 415345..416556 (+) 1212 WP_213432802.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26269.42 Da        Isoelectric Point: 3.9817

>NTDB_id=624736 LMK00_RS01985 WP_165713158.1 411228..411911(+) (mecA) [Lactococcus formosensis strain I4/6O]
MQYEEINEKTIKISLTFQDLVDHDVKLSDFFTNQSMVENLFYELVEELGLEERFSSGLLTFQIQPFPKGVNIIVTEENID
IDPNNLPDDPEEFEQLMTDFFGRVEDLKQNGGAMTDTSTTETKETQVENKPDPDFVFYSLEFENMSQLLMAVKNVKIDAE
ESELYSYQDKFYLIILDNQKSKGKTAVSSMRARMLEYGQETVNSRETLQEYGEILINTRALEVLSKI

Nucleotide


Download         Length: 684 bp        

>NTDB_id=624736 LMK00_RS01985 WP_165713158.1 411228..411911(+) (mecA) [Lactococcus formosensis strain I4/6O]
ATGCAATACGAAGAAATAAACGAAAAAACAATAAAGATTAGCCTAACCTTCCAAGATTTGGTTGATCATGATGTCAAACT
CTCTGATTTTTTTACTAACCAATCAATGGTGGAAAATCTTTTTTATGAGTTGGTAGAAGAGCTAGGACTTGAGGAACGGT
TCTCGTCAGGACTTTTAACCTTCCAAATTCAACCTTTCCCTAAAGGGGTGAATATTATTGTTACTGAAGAAAACATCGAT
ATTGATCCCAATAATCTTCCAGATGATCCTGAAGAATTTGAGCAGCTCATGACGGATTTCTTTGGACGTGTGGAAGATTT
AAAACAAAATGGCGGAGCAATGACAGATACAAGTACAACTGAAACTAAAGAAACACAAGTAGAAAACAAACCAGATCCAG
ATTTTGTCTTCTATTCCCTAGAATTTGAAAATATGTCTCAACTTTTGATGGCAGTAAAAAATGTTAAAATTGATGCAGAA
GAGTCTGAACTTTATAGCTATCAAGACAAGTTTTACTTGATTATTTTAGATAATCAAAAATCAAAAGGAAAGACAGCTGT
AAGCTCCATGCGTGCCCGAATGTTAGAGTACGGACAGGAAACGGTCAACAGTCGCGAAACACTACAAGAATATGGCGAGA
TATTGATCAACACTCGTGCTTTGGAAGTTCTCTCAAAAATTTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-224)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

53.617

100

0.555
  mecA Lactococcus lactis subsp. cremoris KW2

53.191

100

0.551