Detailed information
Bioinformatically predicted
Overview
| Name | CJE1441 | Type | Regulator |
| Locus tag | LL135_RS02460 | Genome accession | NZ_CP086162 |
| Coordinates | 468775..469437 (-) | Length | 220 a.a. |
| NCBI ID | WP_227898233.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain SHI3134 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 456322..484959 | 468775..469437 | within | 0 |
Gene organization within MGE regions
Location: 456322..484959
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL135_RS02360 (LL135_02360) | - | 456322..457524 (+) | 1203 | WP_002875038.1 | tyrosine-type recombinase/integrase | - |
| LL135_RS02365 (LL135_02365) | - | 457521..457691 (-) | 171 | WP_002864902.1 | helix-turn-helix transcriptional regulator | - |
| LL135_RS02370 (LL135_02370) | - | 457684..458226 (-) | 543 | WP_038402049.1 | pentapeptide repeat-containing protein | - |
| LL135_RS02375 (LL135_02375) | - | 458374..459021 (-) | 648 | WP_227898224.1 | hypothetical protein | - |
| LL135_RS02380 (LL135_02380) | - | 459026..459478 (-) | 453 | WP_227898225.1 | YopX family protein | - |
| LL135_RS02385 (LL135_02385) | - | 459481..460206 (-) | 726 | WP_227898226.1 | Rha family transcriptional regulator | - |
| LL135_RS02390 (LL135_02390) | - | 460333..461034 (-) | 702 | WP_227898228.1 | helix-turn-helix domain-containing protein | - |
| LL135_RS02395 (LL135_02395) | - | 461045..461884 (-) | 840 | WP_131186808.1 | hypothetical protein | - |
| LL135_RS02400 (LL135_02400) | - | 461939..462691 (-) | 753 | WP_052847758.1 | DNA-methyltransferase | - |
| LL135_RS02405 (LL135_02405) | - | 462672..462950 (-) | 279 | WP_002861642.1 | hypothetical protein | - |
| LL135_RS02410 (LL135_02410) | - | 462931..463626 (-) | 696 | WP_115766750.1 | hypothetical protein | - |
| LL135_RS02415 (LL135_02415) | - | 463626..464363 (-) | 738 | WP_070210179.1 | hypothetical protein | - |
| LL135_RS02420 (LL135_02420) | - | 464365..465219 (-) | 855 | WP_227898230.1 | lambda-exonuclease family protein | - |
| LL135_RS02425 (LL135_02425) | - | 465221..465448 (-) | 228 | WP_052796437.1 | helix-turn-helix domain-containing protein | - |
| LL135_RS02430 (LL135_02430) | - | 465439..465696 (-) | 258 | WP_052796436.1 | hypothetical protein | - |
| LL135_RS02435 (LL135_02435) | - | 465687..465956 (-) | 270 | WP_002874357.1 | hypothetical protein | - |
| LL135_RS02440 (LL135_02440) | - | 466752..467024 (-) | 273 | WP_227898232.1 | hypothetical protein | - |
| LL135_RS02445 (LL135_02445) | - | 467168..467899 (+) | 732 | WP_002861653.1 | hypothetical protein | - |
| LL135_RS02450 (LL135_02450) | - | 467944..468219 (-) | 276 | WP_002840259.1 | hypothetical protein | - |
| LL135_RS02455 (LL135_02455) | - | 468206..468709 (-) | 504 | WP_002840261.1 | Panacea domain-containing protein | - |
| LL135_RS02460 (LL135_02460) | CJE1441 | 468775..469437 (-) | 663 | WP_227898233.1 | DNA/RNA non-specific endonuclease | Regulator |
| LL135_RS02465 (LL135_02465) | - | 469457..470230 (-) | 774 | WP_002929400.1 | hypothetical protein | - |
| LL135_RS02470 (LL135_02470) | - | 470227..470961 (-) | 735 | WP_022552241.1 | helix-turn-helix transcriptional regulator | - |
| LL135_RS02475 (LL135_02475) | - | 471073..471291 (+) | 219 | WP_002826741.1 | hypothetical protein | - |
| LL135_RS02480 (LL135_02480) | - | 471324..471650 (-) | 327 | WP_032599246.1 | hypothetical protein | - |
| LL135_RS02485 (LL135_02485) | - | 471693..472691 (+) | 999 | WP_227898235.1 | hypothetical protein | - |
| LL135_RS02490 (LL135_02490) | - | 472702..473352 (+) | 651 | WP_002871222.1 | hypothetical protein | - |
| LL135_RS02495 (LL135_02495) | - | 473370..473750 (+) | 381 | WP_002896784.1 | hypothetical protein | - |
| LL135_RS02500 (LL135_02500) | - | 473750..474136 (+) | 387 | WP_002795630.1 | terminase small subunit | - |
| LL135_RS02505 (LL135_02505) | - | 474133..475425 (+) | 1293 | WP_060787592.1 | terminase large subunit domain-containing protein | - |
| LL135_RS02510 (LL135_02510) | - | 475415..475687 (+) | 273 | WP_002781524.1 | hypothetical protein | - |
| LL135_RS02515 (LL135_02515) | - | 475668..477206 (+) | 1539 | WP_227898237.1 | hypothetical protein | - |
| LL135_RS02520 (LL135_02520) | - | 477199..477402 (+) | 204 | WP_000931940.1 | hypothetical protein | - |
| LL135_RS02525 (LL135_02525) | - | 477392..478039 (+) | 648 | WP_002865492.1 | hypothetical protein | - |
| LL135_RS02530 (LL135_02530) | - | 478050..478430 (+) | 381 | WP_002861666.1 | hypothetical protein | - |
| LL135_RS02535 (LL135_02535) | - | 478695..479906 (+) | 1212 | WP_227898238.1 | hypothetical protein | - |
| LL135_RS02540 (LL135_02540) | - | 479906..483544 (+) | 3639 | WP_227898239.1 | hypothetical protein | - |
| LL135_RS02545 (LL135_02545) | - | 483925..484959 (+) | 1035 | WP_227898240.1 | SU10 major capsid protein | - |
Sequence
Protein
Download Length: 220 a.a. Molecular weight: 25844.38 Da Isoelectric Point: 9.9096
>NTDB_id=623019 LL135_RS02460 WP_227898233.1 468775..469437(-) (CJE1441) [Campylobacter jejuni strain SHI3134]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQAALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHKVENENIKNYKVNCDILTSS
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQAALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHKVENENIKNYKVNCDILTSS
Nucleotide
Download Length: 663 bp
>NTDB_id=623019 LL135_RS02460 WP_227898233.1 468775..469437(-) (CJE1441) [Campylobacter jejuni strain SHI3134]
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGAAAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGCAGCTTTGAAGCTTGGAAGTTTAGAGGTTTTG
AATTTAGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAATCATAAAGTAGAAAATGAGAATATAAAAAATTATAAGGTTAATT
GTGATATTTTAACCAGCAGTTGA
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGAAAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGCAGCTTTGAAGCTTGGAAGTTTAGAGGTTTTG
AATTTAGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAATCATAAAGTAGAAAATGAGAATATAAAAAATTATAAGGTTAATT
GTGATATTTTAACCAGCAGTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE1441 | Campylobacter jejuni RM1221 |
92.558 |
97.727 |
0.905 |
| CJE0566 | Campylobacter jejuni RM1221 |
92.558 |
97.727 |
0.905 |