Detailed information
Bioinformatically predicted
Overview
| Name | CJE1441 | Type | Regulator |
| Locus tag | LL147_RS02460 | Genome accession | NZ_CP086159 |
| Coordinates | 468774..469436 (-) | Length | 220 a.a. |
| NCBI ID | WP_227898233.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain SHI6972 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 456321..484958 | 468774..469436 | within | 0 |
Gene organization within MGE regions
Location: 456321..484958
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL147_RS02360 (LL147_02360) | - | 456321..457523 (+) | 1203 | WP_002875038.1 | tyrosine-type recombinase/integrase | - |
| LL147_RS02365 (LL147_02365) | - | 457520..457690 (-) | 171 | WP_002864902.1 | helix-turn-helix transcriptional regulator | - |
| LL147_RS02370 (LL147_02370) | - | 457683..458225 (-) | 543 | WP_038402049.1 | pentapeptide repeat-containing protein | - |
| LL147_RS02375 (LL147_02375) | - | 458373..459020 (-) | 648 | WP_227898224.1 | hypothetical protein | - |
| LL147_RS02380 (LL147_02380) | - | 459025..459477 (-) | 453 | WP_227898225.1 | YopX family protein | - |
| LL147_RS02385 (LL147_02385) | - | 459480..460205 (-) | 726 | WP_227898226.1 | Rha family transcriptional regulator | - |
| LL147_RS02390 (LL147_02390) | - | 460332..461033 (-) | 702 | WP_227898228.1 | helix-turn-helix domain-containing protein | - |
| LL147_RS02395 (LL147_02395) | - | 461044..461883 (-) | 840 | WP_131186808.1 | hypothetical protein | - |
| LL147_RS02400 (LL147_02400) | - | 461938..462690 (-) | 753 | WP_052847758.1 | DNA-methyltransferase | - |
| LL147_RS02405 (LL147_02405) | - | 462671..462949 (-) | 279 | WP_002861642.1 | hypothetical protein | - |
| LL147_RS02410 (LL147_02410) | - | 462930..463625 (-) | 696 | WP_115766750.1 | hypothetical protein | - |
| LL147_RS02415 (LL147_02415) | - | 463625..464362 (-) | 738 | WP_070210179.1 | hypothetical protein | - |
| LL147_RS02420 (LL147_02420) | - | 464364..465218 (-) | 855 | WP_227898230.1 | lambda-exonuclease family protein | - |
| LL147_RS02425 (LL147_02425) | - | 465220..465447 (-) | 228 | WP_052796437.1 | helix-turn-helix domain-containing protein | - |
| LL147_RS02430 (LL147_02430) | - | 465438..465695 (-) | 258 | WP_052796436.1 | hypothetical protein | - |
| LL147_RS02435 (LL147_02435) | - | 465686..465955 (-) | 270 | WP_002874357.1 | hypothetical protein | - |
| LL147_RS02440 (LL147_02440) | - | 466751..467023 (-) | 273 | WP_227898232.1 | hypothetical protein | - |
| LL147_RS02445 (LL147_02445) | - | 467167..467898 (+) | 732 | WP_002861653.1 | hypothetical protein | - |
| LL147_RS02450 (LL147_02450) | - | 467943..468218 (-) | 276 | WP_002840259.1 | hypothetical protein | - |
| LL147_RS02455 (LL147_02455) | - | 468205..468708 (-) | 504 | WP_002840261.1 | Panacea domain-containing protein | - |
| LL147_RS02460 (LL147_02460) | CJE1441 | 468774..469436 (-) | 663 | WP_227898233.1 | DNA/RNA non-specific endonuclease | Regulator |
| LL147_RS02465 (LL147_02465) | - | 469456..470229 (-) | 774 | WP_002929400.1 | hypothetical protein | - |
| LL147_RS02470 (LL147_02470) | - | 470226..470960 (-) | 735 | WP_022552241.1 | helix-turn-helix transcriptional regulator | - |
| LL147_RS02475 (LL147_02475) | - | 471072..471290 (+) | 219 | WP_002826741.1 | hypothetical protein | - |
| LL147_RS02480 (LL147_02480) | - | 471323..471649 (-) | 327 | WP_032599246.1 | hypothetical protein | - |
| LL147_RS02485 (LL147_02485) | - | 471692..472690 (+) | 999 | WP_227898235.1 | hypothetical protein | - |
| LL147_RS02490 (LL147_02490) | - | 472701..473351 (+) | 651 | WP_002871222.1 | hypothetical protein | - |
| LL147_RS02495 (LL147_02495) | - | 473369..473749 (+) | 381 | WP_002896784.1 | hypothetical protein | - |
| LL147_RS02500 (LL147_02500) | - | 473749..474135 (+) | 387 | WP_002795630.1 | terminase small subunit | - |
| LL147_RS02505 (LL147_02505) | - | 474132..475424 (+) | 1293 | WP_060787592.1 | terminase large subunit domain-containing protein | - |
| LL147_RS02510 (LL147_02510) | - | 475414..475686 (+) | 273 | WP_002781524.1 | hypothetical protein | - |
| LL147_RS02515 (LL147_02515) | - | 475667..477205 (+) | 1539 | WP_227898237.1 | hypothetical protein | - |
| LL147_RS02520 (LL147_02520) | - | 477198..477401 (+) | 204 | WP_000931940.1 | hypothetical protein | - |
| LL147_RS02525 (LL147_02525) | - | 477391..478038 (+) | 648 | WP_002865492.1 | hypothetical protein | - |
| LL147_RS02530 (LL147_02530) | - | 478049..478429 (+) | 381 | WP_002861666.1 | hypothetical protein | - |
| LL147_RS02535 (LL147_02535) | - | 478694..479905 (+) | 1212 | WP_227898238.1 | hypothetical protein | - |
| LL147_RS02540 (LL147_02540) | - | 479905..483543 (+) | 3639 | WP_227898239.1 | hypothetical protein | - |
| LL147_RS02545 (LL147_02545) | - | 483924..484958 (+) | 1035 | WP_227898240.1 | SU10 major capsid protein | - |
Sequence
Protein
Download Length: 220 a.a. Molecular weight: 25844.38 Da Isoelectric Point: 9.9096
>NTDB_id=622936 LL147_RS02460 WP_227898233.1 468774..469436(-) (CJE1441) [Campylobacter jejuni strain SHI6972]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQAALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHKVENENIKNYKVNCDILTSS
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQAALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHKVENENIKNYKVNCDILTSS
Nucleotide
Download Length: 663 bp
>NTDB_id=622936 LL147_RS02460 WP_227898233.1 468774..469436(-) (CJE1441) [Campylobacter jejuni strain SHI6972]
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGAAAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGCAGCTTTGAAGCTTGGAAGTTTAGAGGTTTTG
AATTTAGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAATCATAAAGTAGAAAATGAGAATATAAAAAATTATAAGGTTAATT
GTGATATTTTAACCAGCAGTTGA
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGAAAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGCAGCTTTGAAGCTTGGAAGTTTAGAGGTTTTG
AATTTAGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAATCATAAAGTAGAAAATGAGAATATAAAAAATTATAAGGTTAATT
GTGATATTTTAACCAGCAGTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE1441 | Campylobacter jejuni RM1221 |
92.558 |
97.727 |
0.905 |
| CJE0566 | Campylobacter jejuni RM1221 |
92.558 |
97.727 |
0.905 |