Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   LLZ90_RS02235 Genome accession   NZ_CP086129
Coordinates   391129..392163 (+) Length   344 a.a.
NCBI ID   WP_000732713.1    Uniprot ID   A0AAV3JGP6
Organism   Streptococcus agalactiae strain MIN-181     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 386129..397163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLZ90_RS02195 (LLZ90_02195) tsaE 386205..386648 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  LLZ90_RS02200 (LLZ90_02200) - 386641..387162 (+) 522 WP_000043146.1 GNAT family N-acetyltransferase -
  LLZ90_RS02205 (LLZ90_02205) brpA 387171..388478 (+) 1308 WP_167710512.1 biofilm formation/cell division transcriptional regulator BrpA -
  LLZ90_RS02210 (LLZ90_02210) - 388542..388838 (-) 297 WP_000690175.1 hypothetical protein -
  LLZ90_RS02215 (LLZ90_02215) - 388835..389254 (-) 420 WP_000368097.1 HIT family protein -
  LLZ90_RS02220 (LLZ90_02220) - 389590..390093 (+) 504 WP_000773453.1 hypothetical protein -
  LLZ90_RS02225 (LLZ90_02225) - 390145..390330 (-) 186 WP_000368100.1 hypothetical protein -
  LLZ90_RS02230 (LLZ90_02230) pptA 390402..391127 (+) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  LLZ90_RS02235 (LLZ90_02235) pptB 391129..392163 (+) 1035 WP_000732713.1 ABC transporter permease Regulator
  LLZ90_RS02240 (LLZ90_02240) ccrZ 392221..393021 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  LLZ90_RS02245 (LLZ90_02245) trmB 393011..393646 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  LLZ90_RS02255 (LLZ90_02255) rimP 394136..394612 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  LLZ90_RS02260 (LLZ90_02260) nusA 394648..395799 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  LLZ90_RS02265 (LLZ90_02265) rnpM 395821..396117 (+) 297 WP_001140526.1 RNase P modulator RnpM -
  LLZ90_RS02270 (LLZ90_02270) - 396110..396412 (+) 303 WP_001065560.1 YlxQ-related RNA-binding protein -
  LLZ90_RS10595 - 396432..396584 (+) 153 Protein_372 translation initiation factor IF-2 N-terminal domain-containing protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40206.54 Da        Isoelectric Point: 10.4988

>NTDB_id=622753 LLZ90_RS02235 WP_000732713.1 391129..392163(+) (pptB) [Streptococcus agalactiae strain MIN-181]
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSQLLKDFPKTHWPIIVIVSIIILMLLAMGGIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=622753 LLZ90_RS02235 WP_000732713.1 391129..392163(+) (pptB) [Streptococcus agalactiae strain MIN-181]
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAACGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCAGTTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGGAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGTTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTAATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAAGGAATTTCGACAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAACTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTGTGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-159)

Bacterial ABC transporter protein EcsB (EcsB)

(147-329)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.547

100

0.485
  pptB Streptococcus salivarius strain HSISS4

48.256

100

0.483