Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LL045_RS11445 Genome accession   NZ_CP086083
Coordinates   2328824..2330110 (-) Length   428 a.a.
NCBI ID   WP_021721862.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain EIP20A     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2323824..2335110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LL045_RS11430 (LL045_11400) - 2325015..2325551 (-) 537 WP_058205112.1 hypothetical protein -
  LL045_RS11435 (LL045_11405) - 2325557..2326888 (-) 1332 WP_098394211.1 FAD/NAD(P)-binding oxidoreductase -
  LL045_RS11440 (LL045_11410) - 2326904..2328754 (-) 1851 WP_029344534.1 proline--tRNA ligase -
  LL045_RS11445 (LL045_11415) eeP 2328824..2330110 (-) 1287 WP_021721862.1 RIP metalloprotease RseP Regulator
  LL045_RS11450 (LL045_11420) - 2330129..2330932 (-) 804 WP_038602374.1 phosphatidate cytidylyltransferase -
  LL045_RS11455 (LL045_11425) - 2330932..2331666 (-) 735 WP_394530227.1 isoprenyl transferase -
  LL045_RS11460 (LL045_11430) yajC 2332038..2332370 (-) 333 WP_021721860.1 preprotein translocase subunit YajC -
  LL045_RS11465 (LL045_11435) - 2332465..2333162 (-) 698 Protein_2231 DNA alkylation repair protein -
  LL045_RS11470 (LL045_11440) rlmH 2333181..2333660 (-) 480 WP_038602380.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46499.09 Da        Isoelectric Point: 6.7740

>NTDB_id=622406 LL045_RS11445 WP_021721862.1 2328824..2330110(-) (eeP) [Lactococcus lactis subsp. lactis strain EIP20A]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSKILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVINPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSASVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=622406 LL045_RS11445 WP_021721862.1 2328824..2330110(-) (eeP) [Lactococcus lactis subsp. lactis strain EIP20A]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAAAAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCGCTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAATAAATCCAGAAGCTGAAAATTCTGTTAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACGGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCAGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGCTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGTCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCGACTGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGACAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTCCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
CAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57