Detailed information NTG0622271

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LLJ08_RS07390
• Genome accession: NZ_CP086067
• Coordinates: 1582598..1584823 (+)
• Length: 741 a.a.
• NCBI ID: WP_228208585.1
• Uniprot ID: -
• Organism: Stutzerimonas chloritidismutans strain 6L11
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1577598..1589823

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLJ08_RS07360 (LLJ08_07365)	-	1577747..1578052 (-)	306	WP_228208583.1	phosphodiesterase	-
LLJ08_RS07365 (LLJ08_07370)	-	1578056..1578691 (-)	636	WP_003299648.1	PilZ domain-containing protein	-
LLJ08_RS07370 (LLJ08_07375)	-	1578728..1579975 (+)	1248	WP_228208584.1	lipoprotein-releasing ABC transporter permease subunit	-
LLJ08_RS07375 (LLJ08_07380)	lolD	1579983..1580681 (+)	699	WP_003299646.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
LLJ08_RS07380 (LLJ08_07385)	-	1580681..1581925 (+)	1245	WP_031298331.1	lipoprotein-releasing ABC transporter permease subunit	-
LLJ08_RS07385 (LLJ08_07390)	-	1581932..1582447 (-)	516	WP_003299644.1	DUF2062 domain-containing protein	-
LLJ08_RS07390 (LLJ08_07395)	comA	1582598..1584823 (+)	2226	WP_228208585.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LLJ08_RS07395 (LLJ08_07400)	-	1584895..1585527 (+)	633	WP_031298327.1	MotA/TolQ/ExbB proton channel family protein	-
LLJ08_RS07400 (LLJ08_07405)	-	1585524..1585952 (+)	429	WP_014820907.1	ExbD/TolR family protein	-
LLJ08_RS07405 (LLJ08_07410)	lpxK	1585952..1586956 (+)	1005	WP_228208586.1	tetraacyldisaccharide 4'-kinase	-
LLJ08_RS07410 (LLJ08_07415)	-	1587002..1587187 (+)	186	WP_003299639.1	Trm112 family protein	-
LLJ08_RS07415 (LLJ08_07420)	kdsB	1587184..1587948 (+)	765	WP_044316182.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LLJ08_RS07420 (LLJ08_07425)	-	1587950..1588414 (+)	465	WP_228208587.1	low molecular weight protein-tyrosine-phosphatase	-
LLJ08_RS07425 (LLJ08_07430)	murB	1588411..1589430 (+)	1020	WP_041014485.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80992.43 Da
• Isoelectric Point: 9.8727

>NTDB_id=622271 LLJ08_RS07390 WP_228208585.1 1582598..1584823(+) (comA) [Stutzerimonas chloritidismutans strain 6L11]
MRTWMLALAAGLVLPRFLPALPSVWILCVLGVLGGLLLSRRRWASSGLLLLGFAWACWQCQSAIDDRLPVSQDGRTYWIQ
GTVSGLPSSTGDVVRFELEDIESRHAGLPSKVRLSWYGGPQVRAGERWRLAARLKRPRGLVNPHAFDYEAWLLARRIGAT
GSVKAGERLFAPHSVNSWRDRLRLRLMEVSASGRQGAIAALVVGDDSGLSREDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALAARWGFWPSRWPWLPCACALALAGALSYGWLAGFDVPVRRACLMVAVVLLWRLRFRHLGVWQPLLLALNGVLLV
DPLVSLQPGFWLSFGAVAVLALAFSGRLGRWKWWATLTRAQWAASLGLLPLLLTLGLPVSASGPLANLIAVPWVSLTVPF
ALLGTLLLPLGAIGETLLWLVGTSLALLFELLSAMATWQPAWLAVGIPIWALLMIGLGVLLMLLPSGVPVRALGLVLLAP
LVYPPYSEVAEGRAQVSVLDVGQGLSVLVRTREHTLLYDAGPRQGDFDTGERVVFPSLRSLGVKRLDILLLSHADNDHSG
GAQAIRRLLPVVRTVSGEPQRHATDLNAKPCENGAEWRWNGVRFSLWQWQAARESNQTSCVLLVEANGERVLLTGDIDQA
AEQALLLSGQDLKAQWLLLPHHGSRSSSSEPFLRAVEPSAALISRSLHNAFGHPHPTVTARLEASAVDVYDTALHGAIRI
DLGDFSVAEIQRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=622271 LLJ08_RS07390 WP_228208585.1 1582598..1584823(+) (comA) [Stutzerimonas chloritidismutans strain 6L11]
ATGCGCACATGGATGTTGGCGCTCGCGGCAGGCCTCGTCTTGCCCCGTTTCTTACCGGCGTTGCCCTCTGTCTGGATCTT
GTGCGTGCTTGGCGTGCTGGGGGGCTTGCTGCTTTCGCGTCGGCGCTGGGCGTCGTCTGGGTTGCTTCTCCTCGGGTTCG
CCTGGGCATGCTGGCAGTGCCAGAGTGCTATTGATGATCGCCTGCCCGTTTCGCAAGATGGCCGGACATACTGGATCCAG
GGGACGGTCAGTGGATTGCCCTCCAGCACGGGCGATGTCGTGCGCTTCGAGTTGGAGGATATCGAGTCGAGGCATGCCGG
GCTGCCGTCAAAGGTGCGTCTGTCCTGGTACGGCGGCCCGCAAGTGCGGGCCGGCGAGCGCTGGCGGCTTGCGGCTCGAC
TGAAACGTCCGCGTGGCCTGGTCAATCCGCATGCGTTCGACTACGAAGCCTGGTTGCTGGCGCGTCGCATTGGCGCGACC
GGTTCGGTCAAGGCGGGAGAGCGCCTCTTCGCGCCGCACTCCGTGAATAGTTGGCGCGACCGCTTGAGGCTCCGTCTGAT
GGAGGTCTCCGCGTCCGGTCGACAAGGCGCGATCGCGGCACTGGTGGTCGGTGATGACTCCGGCCTGAGTCGTGAGGATT
GGCAGGTGTTGCAGGACACCGGCACGGTGCACCTGATGGTCATATCCGGACAGCACATCGGCATGCTGGCTGGCTTGCTA
TACGGACTGGTTGCGCTAGCAGCTCGATGGGGCTTCTGGCCCAGCCGTTGGCCCTGGCTTCCATGCGCATGCGCGTTGGC
TCTCGCTGGTGCGCTTTCCTATGGATGGCTTGCGGGGTTCGATGTGCCGGTGCGTCGTGCGTGTCTCATGGTCGCCGTGG
TCCTGCTCTGGCGCTTGCGCTTTCGTCATCTGGGTGTCTGGCAGCCGCTGTTGCTGGCGCTGAATGGTGTCCTGCTGGTC
GATCCCCTGGTCTCGTTGCAGCCGGGGTTTTGGCTCTCATTCGGGGCCGTTGCGGTGCTCGCGCTGGCGTTCTCCGGTCG
GCTCGGCCGATGGAAGTGGTGGGCGACGCTGACGCGCGCCCAATGGGCAGCTTCCCTCGGCCTGCTGCCTCTGTTACTGA
CGCTGGGACTGCCGGTCAGCGCCAGCGGGCCTTTGGCCAATCTGATTGCCGTACCCTGGGTAAGCCTCACCGTTCCCTTC
GCGCTGCTCGGTACGTTGCTTCTGCCGTTGGGCGCTATCGGCGAGACGCTACTCTGGTTGGTCGGCACCTCGCTGGCCCT
GCTGTTCGAGCTGCTGTCCGCCATGGCTACCTGGCAACCCGCCTGGCTGGCGGTCGGTATACCCATCTGGGCCTTGCTGA
TGATTGGGCTGGGTGTGCTGTTGATGTTATTGCCGTCAGGTGTGCCGGTGCGTGCGCTCGGACTGGTGCTCCTGGCGCCG
TTGGTGTATCCCCCGTATTCCGAAGTAGCCGAAGGACGGGCGCAGGTCTCGGTGCTGGATGTGGGGCAGGGGCTTTCGGT
ACTGGTGCGGACCCGGGAGCACACGTTGCTCTACGATGCGGGACCGAGGCAGGGTGATTTCGATACCGGCGAGCGTGTCG
TGTTCCCGTCGCTGCGAAGCCTGGGCGTGAAGAGGCTGGACATACTGCTGCTGAGCCATGCGGATAACGATCATTCCGGT
GGCGCTCAGGCGATCCGTCGACTGCTTCCGGTCGTGCGGACCGTCAGTGGGGAGCCGCAACGACATGCGACCGATCTGAA
TGCCAAGCCCTGTGAAAACGGTGCAGAGTGGCGGTGGAACGGCGTGCGTTTCAGTCTCTGGCAATGGCAGGCGGCCCGGG
AAAGCAATCAGACGTCATGCGTTCTGCTGGTCGAGGCCAATGGCGAACGGGTGCTGCTTACCGGCGATATCGATCAGGCC
GCGGAGCAGGCGTTGCTGCTCAGCGGACAGGACCTAAAGGCGCAGTGGTTGCTATTGCCTCATCACGGCAGCCGCAGCTC
ATCGTCGGAGCCATTCCTGCGAGCGGTGGAACCGAGCGCCGCGCTGATCTCGCGCAGCCTGCACAACGCTTTCGGTCATC
CTCATCCGACTGTGACCGCTCGCCTCGAAGCGTCCGCAGTCGACGTTTACGACACCGCCTTGCACGGCGCGATCCGCATC
GATCTCGGCGATTTCTCGGTGGCGGAGATACAGCGTGCGGAACGTCGGTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

• Domain of unknown function (DUF4131) (DUF4131) (22-168)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.295	96.896	0.642
comA	Ralstonia pseudosolanacearum GMI1000	36.494	100	0.379