Detailed information NTG0622170

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LK685_RS08140
• Genome accession: NZ_CP086061
• Coordinates: 1565104..1567434 (+)
• Length: 776 a.a.
• NCBI ID: WP_229762702.1
• Uniprot ID: -
• Organism: Bacillus sp. BC1-43
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1560104..1572434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK685_RS08100 (LK685_08105)	yhbY	1560341..1560631 (+)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
LK685_RS08105 (LK685_08110)	-	1560643..1561212 (+)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
LK685_RS08110 (LK685_08115)	yqeK	1561202..1561762 (+)	561	WP_229762701.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
LK685_RS08115 (LK685_08120)	rsfS	1561780..1562136 (+)	357	WP_041333759.1	ribosome silencing factor	-
LK685_RS08120 (LK685_08125)	-	1562133..1562876 (+)	744	WP_003229973.1	class I SAM-dependent methyltransferase	-
LK685_RS08125 (LK685_08130)	comER	1562942..1563763 (-)	822	WP_014480313.1	late competence protein ComER	-
LK685_RS08130 (LK685_08135)	comEA	1563847..1564464 (+)	618	WP_004398514.1	competence protein ComEA	Machinery gene
LK685_RS08135 (LK685_08140)	-	1564531..1565100 (+)	570	WP_003229978.1	ComE operon protein 2	-
LK685_RS08140 (LK685_08145)	comEC	1565104..1567434 (+)	2331	WP_229762702.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LK685_RS08145 (LK685_08150)	-	1567474..1567608 (-)	135	WP_003229983.1	YqzM family protein	-
LK685_RS08150 (LK685_08155)	-	1567649..1567798 (+)	150	WP_003229985.1	hypothetical protein	-
LK685_RS08155 (LK685_08160)	holA	1567838..1568881 (+)	1044	WP_029317888.1	DNA polymerase III subunit delta	-
LK685_RS08160 (LK685_08165)	rpsT	1568896..1569162 (-)	267	WP_131227637.1	30S ribosomal protein S20	-
LK685_RS08165 (LK685_08170)	gpr	1569366..1570472 (+)	1107	WP_014480309.1	GPR endopeptidase	-
LK685_RS08170 (LK685_08175)	spoIIP	1570535..1571740 (+)	1206	WP_014477383.1	spore autolysin SpoIIP	-
LK685_RS08175 (LK685_08180)	-	1571757..1572095 (+)	339	WP_014477382.1	YqxA family protein	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86771.27 Da
• Isoelectric Point: 6.9842

>NTDB_id=622170 LK685_RS08140 WP_229762702.1 1565104..1567434(+) (comEC) [Bacillus sp. BC1-43]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVETPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSVSFGRLFFSWFDLLISWTNRLITNIADVEVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=622170 LK685_RS08140 WP_229762702.1 1565104..1567434(+) (comEC) [Bacillus sp. BC1-43]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTCATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTGAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATTCAAAACTGCAGCGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTTTGCCTCCTGATTCGGCAGGGATTGTACAGGCACTTACAGTTGGTGACAGAT
TTTATGTGGAGGATGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCAATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATTCGCCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGTGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGTTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGAAGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGAGGC
ATTTGCTGCACGGTGATGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTACTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAGGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
ACACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGACCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	98.454	100	0.985