Detailed information NTG0622143

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: LK685_RS01900
• Genome accession: NZ_CP086061
• Coordinates: 371608..372753 (-)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus sp. BC1-43
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 366608..377753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK685_RS01875 (LK685_01880)	-	366872..368947 (-)	2076	WP_144482919.1	transglycosylase domain-containing protein	-
LK685_RS01880 (LK685_01885)	speE	369150..369980 (+)	831	WP_003227543.1	spermidine synthase	-
LK685_RS01885 (LK685_01890)	speB	370041..370913 (+)	873	WP_015250983.1	agmatinase	-
LK685_RS01890 (LK685_01895)	-	370945..371407 (-)	463	Protein_374	YbaK/EbsC family protein	-
LK685_RS01895 (LK685_01900)	phrF	371505..371624 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
LK685_RS01900 (LK685_01905)	rapF	371608..372753 (-)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
LK685_RS21860	-	372756..372986 (+)	231	Protein_377	hypothetical protein	-
LK685_RS01905 (LK685_01910)	-	372983..374338 (+)	1356	WP_229762623.1	YncE family protein	-
LK685_RS01910 (LK685_01915)	-	374378..375754 (+)	1377	WP_229762624.1	YncE family protein	-
LK685_RS01915 (LK685_01920)	albG	375760..376461 (-)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
LK685_RS01920 (LK685_01925)	-	376458..377738 (-)	1281	WP_229762625.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=622143 LK685_RS01900 WP_029318693.1 371608..372753(-) (rapF) [Bacillus sp. BC1-43]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=622143 LK685_RS01900 WP_029318693.1 371608..372753(-) (rapF) [Bacillus sp. BC1-43]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572