Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   C11O2_RS07160 Genome accession   NZ_AP019548
Coordinates   1393169..1394203 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain 10-85     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1388169..1399203
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C11O2_RS07125 (A85_13130) - 1388945..1389247 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  C11O2_RS07130 (A85_13140) rnpM 1389240..1389536 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  C11O2_RS07135 (A85_13150) nusA 1389552..1390709 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  C11O2_RS07140 (A85_13160) rimP 1390884..1391420 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  C11O2_RS07150 (A85_13170) trmB 1391679..1392314 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  C11O2_RS07155 (A85_13180) ccrZ 1392314..1393105 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  C11O2_RS07160 (A85_13190) pptB 1393169..1394203 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  C11O2_RS07165 (A85_13200) pptA 1394206..1394931 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  C11O2_RS07170 (A85_13210) - 1395003..1395422 (+) 420 WP_002983376.1 HIT family protein -
  C11O2_RS07175 (A85_13220) - 1395419..1395775 (+) 357 WP_002988657.1 hypothetical protein -
  C11O2_RS07180 (A85_13230) brpA 1395886..1397160 (-) 1275 WP_010922584.1 biofilm formation/cell division transcriptional regulator BrpA -
  C11O2_RS07185 (A85_13240) - 1397169..1397693 (-) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  C11O2_RS07190 (A85_13250) tsaE 1397668..1398129 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=62076 C11O2_RS07160 WP_010922583.1 1393169..1394203(-) (pptB) [Streptococcus pyogenes strain 10-85]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=62076 C11O2_RS07160 WP_010922583.1 1393169..1394203(-) (pptB) [Streptococcus pyogenes strain 10-85]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGCCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCCCTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment