Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LIT35_RS03680 Genome accession   NZ_CP085720
Coordinates   718397..719197 (+) Length   266 a.a.
NCBI ID   WP_306821291.1    Uniprot ID   A0A3T0KLW9
Organism   Peribacillus asahii strain KF4     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 713397..724197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIT35_RS03650 (LIT35_03665) - 714472..714843 (-) 372 WP_127759072.1 hypothetical protein -
  LIT35_RS03655 (LIT35_03670) - 715017..715916 (-) 900 WP_127759073.1 LysR family transcriptional regulator -
  LIT35_RS03660 (LIT35_03675) - 716206..716394 (+) 189 WP_127759074.1 hypothetical protein -
  LIT35_RS03665 (LIT35_03680) - 716855..717037 (-) 183 WP_252283029.1 YfhD family protein -
  LIT35_RS03670 (LIT35_03685) - 717068..717193 (-) 126 WP_127759076.1 YfhE family protein -
  LIT35_RS03675 (LIT35_03690) - 717384..718289 (-) 906 WP_252283030.1 TIGR01777 family oxidoreductase -
  LIT35_RS03680 (LIT35_03695) recX 718397..719197 (+) 801 WP_306821291.1 recombination regulator RecX Regulator
  LIT35_RS03685 (LIT35_03700) - 719267..719578 (+) 312 WP_127759078.1 YfhH family protein -
  LIT35_RS03690 (LIT35_03705) - 719621..719758 (-) 138 WP_127759079.1 YpzG family protein -
  LIT35_RS03695 (LIT35_03710) - 719780..719935 (-) 156 WP_127759080.1 small, acid-soluble spore protein K -
  LIT35_RS03700 (LIT35_03715) - 720047..720313 (+) 267 WP_127759081.1 YfhJ family protein -
  LIT35_RS03705 (LIT35_03720) - 720468..721445 (-) 978 WP_127759082.1 metal-dependent hydrolase -
  LIT35_RS03710 (LIT35_03725) mutY 721654..722772 (+) 1119 WP_252283031.1 A/G-specific adenine glycosylase -
  LIT35_RS03715 (LIT35_03730) - 722840..723064 (-) 225 WP_119118824.1 hypothetical protein -
  LIT35_RS03720 (LIT35_03735) fabL 723137..723886 (+) 750 WP_127759085.1 enoyl-[acyl-carrier-protein] reductase FabL -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 31374.02 Da        Isoelectric Point: 7.5052

>NTDB_id=619611 LIT35_RS03680 WP_306821291.1 718397..719197(+) (recX) [Peribacillus asahii strain KF4]
MMPTITKITTQTKRTDRYNIFIDEKYSFSVDEDVLLKFQLKKGKEIDALLLSQIQFHDNIQKSFTDALGYLSYRMRSEAE
IRLYLKQKGIEEPIIHETIHRLYQYNYLDDLDFAKAYVRTHVNGGNKGPVVLQRELKEKGISDPLIQQALLEYPFDVQID
HAKHLANKSIKKEKAISERALQQKLEHMLSRKGFSRDVIVIALEGVTIEKDEQEEWDSLCYQAEKIIRRYRAYEGFLFQQ
KVKQALFRKGFSLELIERYLNELEGE

Nucleotide


Download         Length: 801 bp        

>NTDB_id=619611 LIT35_RS03680 WP_306821291.1 718397..719197(+) (recX) [Peribacillus asahii strain KF4]
ATGATGCCAACAATTACGAAAATAACCACTCAAACAAAGCGAACGGATCGCTATAATATCTTTATAGATGAAAAGTATTC
GTTTAGTGTTGATGAGGATGTTCTGTTAAAGTTTCAATTAAAAAAAGGAAAAGAAATTGATGCGTTATTATTAAGTCAAA
TTCAATTTCATGATAATATTCAAAAATCGTTTACAGATGCTTTAGGATATTTATCGTACCGCATGCGCTCTGAAGCGGAG
ATTCGTTTATATTTAAAGCAGAAAGGAATTGAAGAGCCAATTATTCATGAAACGATTCATAGGCTCTATCAATATAATTA
TTTAGATGATTTAGACTTTGCTAAAGCTTATGTACGAACACATGTGAATGGCGGTAATAAAGGACCGGTTGTGCTTCAGC
GCGAGTTAAAGGAAAAGGGGATTAGTGATCCATTGATTCAACAAGCGCTTCTGGAATATCCCTTTGATGTGCAAATTGAC
CATGCTAAACATTTAGCTAATAAATCAATCAAAAAGGAAAAAGCTATTTCAGAACGGGCTTTGCAACAAAAGCTTGAGCA
TATGTTAAGCCGCAAAGGGTTTTCGCGCGATGTGATTGTCATTGCCCTAGAAGGCGTAACGATTGAAAAAGATGAGCAAG
AAGAGTGGGATTCTTTATGCTATCAGGCGGAAAAAATCATTCGTCGCTACCGCGCTTATGAAGGTTTTTTATTTCAACAA
AAAGTTAAGCAAGCATTATTCCGCAAAGGGTTTTCACTTGAATTAATTGAGCGTTATTTAAACGAATTAGAAGGCGAGTA
A

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(85-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3T0KLW9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

50.951

98.872

0.504