Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   NW981_RS05845 Genome accession   NZ_CP102956
Coordinates   1212324..1213196 (+) Length   290 a.a.
NCBI ID   WP_258410592.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 26-G-G     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1207324..1218196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW981_RS05825 (NW981_05825) sucC 1207438..1208604 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  NW981_RS05830 (NW981_05830) sucD 1208626..1209534 (+) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  NW981_RS05835 (NW981_05835) - 1209761..1210879 (+) 1119 WP_043044513.1 LysM peptidoglycan-binding domain-containing protein -
  NW981_RS05840 (NW981_05840) fmhC 1210907..1212151 (+) 1245 WP_258410591.1 FemA/FemB family glycyltransferase FmhC -
  NW981_RS05845 (NW981_05845) dprA 1212324..1213196 (+) 873 WP_258410592.1 DNA-processing protein DprA Machinery gene
  NW981_RS05850 (NW981_05850) topA 1213370..1215445 (+) 2076 WP_258410593.1 type I DNA topoisomerase -
  NW981_RS05855 (NW981_05855) trmFO 1215601..1216908 (+) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33548.99 Da        Isoelectric Point: 9.5094

>NTDB_id=619352 NW981_RS05845 WP_258410592.1 1212324..1213196(+) (dprA) [Staphylococcus aureus strain 26-G-G]
MIKLFLLKLYWAHFSTKQIHQFLMAYPNVIKEEGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDSEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLANDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=619352 NW981_RS05845 WP_258410592.1 1212324..1213196(+) (dprA) [Staphylococcus aureus strain 26-G-G]
TTGATTAAACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGAGGGAAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATTCTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTAGCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATTGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATCGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGTAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterProScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

99.655

100

0.997
  dprA Staphylococcus aureus N315

99.31

100

0.993